Detailed information
Bioinformatically predicted
Overview
| Name | covR | Type | Regulator |
| Locus tag | DQM55_RS03005 | Genome accession | NZ_LS483364 |
| Coordinates | 579277..579966 (+) | Length | 229 a.a. |
| NCBI ID | WP_111675415.1 | Uniprot ID | A0A2X4AKA2 |
| Organism | Streptococcus sanguinis strain NCTC11086 | ||
| Function | repress comR expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 574277..584966
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM55_RS02995 (NCTC11086_00594) | - | 575550..577358 (+) | 1809 | WP_172454707.1 | ATP-dependent nuclease | - |
| DQM55_RS03000 (NCTC11086_00595) | gndA | 577843..579267 (+) | 1425 | WP_111675414.1 | NADP-dependent phosphogluconate dehydrogenase | - |
| DQM55_RS03005 (NCTC11086_00596) | covR | 579277..579966 (+) | 690 | WP_111675415.1 | DNA-binding response regulator | Regulator |
| DQM55_RS03010 (NCTC11086_00597) | - | 580255..582456 (+) | 2202 | WP_111675416.1 | PTS transporter subunit IIBC | - |
| DQM55_RS03015 (NCTC11086_00598) | - | 582474..583289 (+) | 816 | WP_111675417.1 | endonuclease/exonuclease/phosphatase family protein | - |
| DQM55_RS03020 (NCTC11086_00599) | - | 583326..583820 (-) | 495 | WP_111675418.1 | excalibur calcium-binding domain-containing protein | - |
| DQM55_RS03025 (NCTC11086_00600) | nrdR | 584035..584508 (+) | 474 | WP_002894570.1 | transcriptional regulator NrdR | - |
Sequence
Protein
Download Length: 229 a.a. Molecular weight: 26362.40 Da Isoelectric Point: 5.4261
>NTDB_id=1138662 DQM55_RS03005 WP_111675415.1 579277..579966(+) (covR) [Streptococcus sanguinis strain NCTC11086]
MAKRILLVENEKNLARFVSLELQKESFLVDLAETGHEGLALAKDVDYDLLLLNYDLQDMTASDFAKQLSLIKPASVIIVL
ASREEIAEQQEAIQHFAVSYVVKPFIISDLVERVSIIFRGRDFIDQHCSLLKIPTSYRNLRVDIKNHTVYRGEEVIALTR
REYDLLVTLMGSNKVMSREQLLERVWKYESATETNVVDVYIRYLRSKIDVEGQPSYIKTVRGVGYAMQE
MAKRILLVENEKNLARFVSLELQKESFLVDLAETGHEGLALAKDVDYDLLLLNYDLQDMTASDFAKQLSLIKPASVIIVL
ASREEIAEQQEAIQHFAVSYVVKPFIISDLVERVSIIFRGRDFIDQHCSLLKIPTSYRNLRVDIKNHTVYRGEEVIALTR
REYDLLVTLMGSNKVMSREQLLERVWKYESATETNVVDVYIRYLRSKIDVEGQPSYIKTVRGVGYAMQE
Nucleotide
Download Length: 690 bp
>NTDB_id=1138662 DQM55_RS03005 WP_111675415.1 579277..579966(+) (covR) [Streptococcus sanguinis strain NCTC11086]
ATGGCAAAGCGAATTTTACTAGTAGAAAATGAAAAAAATCTTGCCCGATTTGTGAGTTTGGAACTGCAAAAAGAAAGCTT
TCTTGTAGATTTGGCTGAGACTGGTCATGAGGGACTGGCTCTGGCAAAAGATGTGGATTATGACTTGCTCCTGCTCAACT
ATGATCTTCAAGATATGACTGCCAGCGATTTTGCTAAGCAGCTGAGCTTGATTAAGCCAGCTTCGGTCATTATCGTTTTG
GCTAGTCGCGAAGAGATTGCGGAGCAACAGGAAGCAATCCAGCATTTTGCTGTTTCCTATGTAGTCAAGCCCTTCATTAT
CAGTGATTTAGTGGAGCGTGTCTCTATTATTTTCCGCGGGCGTGACTTTATTGACCAGCACTGCAGCCTCTTGAAAATTC
CGACCTCTTATCGCAATCTGCGAGTGGATATTAAAAATCATACGGTTTACCGTGGTGAGGAAGTTATTGCACTGACGCGG
CGGGAGTACGATCTGCTGGTGACCCTGATGGGCAGCAATAAGGTCATGAGCCGTGAGCAGCTGCTGGAGCGTGTCTGGAA
GTACGAGAGCGCAACGGAGACCAACGTTGTAGATGTTTATATTCGTTATCTGCGCAGTAAAATTGATGTGGAAGGGCAGC
CAAGCTATATCAAAACCGTTCGCGGTGTTGGTTATGCCATGCAAGAATAG
ATGGCAAAGCGAATTTTACTAGTAGAAAATGAAAAAAATCTTGCCCGATTTGTGAGTTTGGAACTGCAAAAAGAAAGCTT
TCTTGTAGATTTGGCTGAGACTGGTCATGAGGGACTGGCTCTGGCAAAAGATGTGGATTATGACTTGCTCCTGCTCAACT
ATGATCTTCAAGATATGACTGCCAGCGATTTTGCTAAGCAGCTGAGCTTGATTAAGCCAGCTTCGGTCATTATCGTTTTG
GCTAGTCGCGAAGAGATTGCGGAGCAACAGGAAGCAATCCAGCATTTTGCTGTTTCCTATGTAGTCAAGCCCTTCATTAT
CAGTGATTTAGTGGAGCGTGTCTCTATTATTTTCCGCGGGCGTGACTTTATTGACCAGCACTGCAGCCTCTTGAAAATTC
CGACCTCTTATCGCAATCTGCGAGTGGATATTAAAAATCATACGGTTTACCGTGGTGAGGAAGTTATTGCACTGACGCGG
CGGGAGTACGATCTGCTGGTGACCCTGATGGGCAGCAATAAGGTCATGAGCCGTGAGCAGCTGCTGGAGCGTGTCTGGAA
GTACGAGAGCGCAACGGAGACCAACGTTGTAGATGTTTATATTCGTTATCTGCGCAGTAAAATTGATGTGGAAGGGCAGC
CAAGCTATATCAAAACCGTTCGCGGTGTTGGTTATGCCATGCAAGAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| covR | Streptococcus salivarius strain HSISS4 |
49.13 |
100 |
0.493 |
| covR | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.035 |
100 |
0.48 |