Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | DQM41_RS05345 | Genome accession | NZ_LS483362 |
| Coordinates | 1010720..1011022 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni strain NCTC11168 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1005720..1016022
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM41_RS05320 (NCTC11168_01065) | rpsR | 1006082..1006342 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| DQM41_RS05325 (NCTC11168_01066) | lon | 1006403..1008778 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| DQM41_RS05330 (NCTC11168_01067) | - | 1008795..1009442 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| DQM41_RS05335 (NCTC11168_01068) | fliW | 1009603..1009992 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| DQM41_RS05340 (NCTC11168_01069) | proC | 1009992..1010723 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| DQM41_RS05345 (NCTC11168_01070) | ctsT | 1010720..1011022 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| DQM41_RS05350 (NCTC11168_01071) | - | 1011019..1011681 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| DQM41_RS05355 (NCTC11168_01072) | - | 1011678..1012130 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| DQM41_RS05360 (NCTC11168_01073) | hemD | 1012127..1012756 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| DQM41_RS05365 (NCTC11168_01074) | thiE | 1012734..1013366 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| DQM41_RS05370 (NCTC11168_01075) | thiD | 1013356..1014168 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| DQM41_RS05375 (NCTC11168_01076) | - | 1014165..1014851 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| DQM41_RS05380 (NCTC11168_01077) | - | 1014848..1015609 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=1138565 DQM41_RS05345 WP_002853046.1 1010720..1011022(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain NCTC11168]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=1138565 DQM41_RS05345 WP_002853046.1 1010720..1011022(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain NCTC11168]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |