Detailed information NTG1138564

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: DQM41_RS05340
• Genome accession: NZ_LS483362
• Coordinates: 1009992..1010723 (+)
• Length: 243 a.a.
• NCBI ID: WP_002858388.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain NCTC11168
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1004992..1015723

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM41_RS05310 (NCTC11168_01063)	rpsF	1005134..1005511 (+)	378	WP_002865739.1	30S ribosomal protein S6	-
DQM41_RS05315 (NCTC11168_01064)	ssb	1005520..1006071 (+)	552	WP_002865738.1	single-stranded DNA-binding protein	-
DQM41_RS05320 (NCTC11168_01065)	rpsR	1006082..1006342 (+)	261	WP_002853032.1	30S ribosomal protein S18	-
DQM41_RS05325 (NCTC11168_01066)	lon	1006403..1008778 (-)	2376	WP_002868636.1	endopeptidase La	-
DQM41_RS05330 (NCTC11168_01067)	-	1008795..1009442 (-)	648	WP_002852961.1	outer membrane protein assembly factor BamD	-
DQM41_RS05335 (NCTC11168_01068)	fliW	1009603..1009992 (+)	390	WP_002852982.1	flagellar assembly protein FliW	-
DQM41_RS05340 (NCTC11168_01069)	proC	1009992..1010723 (+)	732	WP_002858388.1	pyrroline-5-carboxylate reductase	Machinery gene
DQM41_RS05345 (NCTC11168_01070)	ctsT	1010720..1011022 (+)	303	WP_002853046.1	type II secretion system protein	Machinery gene
DQM41_RS05350 (NCTC11168_01071)	-	1011019..1011681 (+)	663	WP_002858296.1	hypothetical protein	-
DQM41_RS05355 (NCTC11168_01072)	-	1011678..1012130 (+)	453	WP_002859148.1	hypothetical protein	-
DQM41_RS05360 (NCTC11168_01073)	hemD	1012127..1012756 (-)	630	WP_002858312.1	uroporphyrinogen-III synthase	-
DQM41_RS05365 (NCTC11168_01074)	thiE	1012734..1013366 (-)	633	WP_002858441.1	thiamine phosphate synthase	-
DQM41_RS05370 (NCTC11168_01075)	thiD	1013356..1014168 (-)	813	WP_002858043.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
DQM41_RS05375 (NCTC11168_01076)	-	1014165..1014851 (-)	687	WP_002858132.1	endonuclease III domain-containing protein	-
DQM41_RS05380 (NCTC11168_01077)	-	1014848..1015609 (-)	762	WP_002852748.1	ATP-binding protein	-

Sequence

Protein

• Length: 243 a.a.
• Molecular weight: 26586.98 Da
• Isoelectric Point: 8.5934

>NTDB_id=1138564 DQM41_RS05340 WP_002858388.1 1009992..1010723(+) (proC) [Campylobacter jejuni subsp. jejuni strain NCTC11168]
MLYILANGSMATALAYGLKDDYEICIVGRSIEKLQALAKEGFKTLLYKDFNIEGKDVILAFKPYALENIAQMLKGQARIL
ISVLANVDFEKLQTIKAQNYVRIIPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSNALLEHEHPAIIKENICSPGGVTIKGIKILEQKGIRGSFFEAINAS
SAK

Nucleotide

• Length: 732 bp

>NTDB_id=1138564 DQM41_RS05340 WP_002858388.1 1009992..1010723(+) (proC) [Campylobacter jejuni subsp. jejuni strain NCTC11168]
ATGCTCTATATACTTGCAAATGGATCTATGGCAACAGCCTTAGCCTATGGGTTAAAAGATGATTATGAAATTTGTATAGT
AGGAAGAAGTATAGAAAAACTTCAAGCCCTCGCCAAAGAAGGCTTTAAAACCTTACTTTACAAAGATTTTAACATAGAAG
GTAAAGATGTTATTTTAGCATTTAAACCTTATGCTTTAGAAAATATTGCTCAAATGCTAAAAGGACAAGCACGTATCTTA
ATCTCTGTTTTAGCCAATGTTGATTTTGAAAAACTACAAACCATCAAAGCTCAAAATTATGTTAGAATAATACCCAATAC
AGCAGCTAAATACAAGGCTTCAACCACACCATATATACTTAAAAACTCTCATTTTGAAAATGAAATTTTAGACATTTTAA
AAACTTTTGGCTCGGCTTATAAATTAGATAATGAAATACAAATGAATGCAGCTATGGCGATTAGCGGCTGCGCTCCTGCT
TTTTTAGCACTTATAGCAGAAAGCATTGCTAATGCTGGAGTTTATGAAGGTTTGTCAAAAGAACTTAGTCTCAATCTTAC
GCGCTCTTTATTTAAAAGCTCTAATGCTTTACTAGAACATGAACATCCAGCTATTATCAAAGAAAATATTTGCTCCCCTG
GCGGAGTTACAATAAAAGGCATAAAAATACTCGAACAAAAAGGAATTCGCGGAAGTTTTTTTGAAGCCATAAATGCTAGC
AGCGCTAAATGA

Domains

Predicted by InterproScan.

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (145-242)

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-85)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	99.177	100	0.992