Detailed information NTG1138143

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: DQL13_RS01750
• Genome accession: NZ_LS483354
• Coordinates: 341084..342130 (+)
• Length: 348 a.a.
• NCBI ID: WP_012514939.1
• Uniprot ID: B4U0X1
• Organism: Streptococcus equi subsp. zooepidemicus strain NCTC11606
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 336084..347130

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL13_RS01735 (NCTC11606_00344)	-	337291..338949 (+)	1659	WP_012514936.1	peptide ABC transporter substrate-binding protein	-
DQL13_RS01740 (NCTC11606_00345)	-	339116..340030 (+)	915	WP_012514937.1	ABC transporter permease	-
DQL13_RS01745 (NCTC11606_00346)	-	340040..341071 (+)	1032	WP_012514938.1	ABC transporter permease	-
DQL13_RS01750 (NCTC11606_00347)	oppD	341084..342130 (+)	1047	WP_012514939.1	ABC transporter ATP-binding protein	Regulator
DQL13_RS01755 (NCTC11606_00348)	amiF	342130..343065 (+)	936	WP_012514940.1	ABC transporter ATP-binding protein	Regulator
DQL13_RS01760 (NCTC11606_00349)	rnjA	343687..345369 (-)	1683	WP_012514941.1	ribonuclease J1	-
DQL13_RS01765 (NCTC11606_00350)	-	345371..345601 (-)	231	WP_012514942.1	DNA-dependent RNA polymerase subunit epsilon	-
DQL13_RS01770 (NCTC11606_00351)	tsaB	345887..346585 (+)	699	WP_012514943.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
DQL13_RS01775 (NCTC11606_00352)	rimI	346588..347013 (+)	426	WP_012514944.1	ribosomal protein S18-alanine N-acetyltransferase	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38543.46 Da
• Isoelectric Point: 6.6666

>NTDB_id=1138143 DQL13_RS01750 WP_012514939.1 341084..342130(+) (oppD) [Streptococcus equi subsp. zooepidemicus strain NCTC11606]
MTNETILSVKNLHVDFKTYAGDVKAIRDISFELKKGETLAIVGESGSGKSVTTRTLMGLNAKNASISGNICFKGKQLNEL
KEEEWVKVRGNEIAMIFQDPMTSLDPTMTIGMQIAEAIMIHQSIHKTEALKRALDLMRQVGIPNAEEHLKDYPHQWSGGM
RQRAVIAIALAANPDILIADEPTTALDVTIQAQILKLMKDIQAQTASSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYHPQHPYTWGLLNSMPTTATAAGSLRSIPGTPPDLLNPPKGDAFAARNEFALDIDHIKEPPMFKVSDSHYAATWLL
DERAPKITPPFPIRKRWAKWQEMEERKA

Nucleotide

• Length: 1047 bp

>NTDB_id=1138143 DQL13_RS01750 WP_012514939.1 341084..342130(+) (oppD) [Streptococcus equi subsp. zooepidemicus strain NCTC11606]
ATGACGAATGAAACCATTTTAAGTGTCAAAAACCTCCATGTTGATTTTAAAACCTACGCTGGAGATGTTAAGGCGATTCG
TGATATCAGCTTTGAGCTAAAAAAGGGAGAGACTCTTGCGATTGTGGGAGAATCAGGCTCAGGAAAATCTGTAACCACTC
GCACGCTGATGGGGTTAAATGCTAAGAATGCAAGTATTTCAGGGAATATTTGCTTTAAGGGCAAGCAGCTCAATGAGCTG
AAAGAGGAGGAATGGGTGAAGGTGCGTGGCAATGAAATTGCCATGATCTTTCAGGATCCGATGACCAGCCTTGATCCTAC
CATGACAATTGGCATGCAGATTGCAGAGGCAATAATGATTCATCAAAGCATTCATAAGACAGAAGCCTTGAAGCGTGCTT
TAGACCTGATGCGTCAGGTTGGTATCCCAAATGCTGAGGAGCACCTTAAGGATTACCCACATCAGTGGTCTGGGGGCATG
CGGCAACGGGCTGTTATTGCCATTGCTCTAGCTGCCAATCCTGATATTTTGATTGCAGATGAGCCGACAACAGCCCTTGA
TGTTACCATTCAGGCCCAGATTTTGAAACTGATGAAGGATATTCAGGCTCAGACCGCATCATCGATTATTTTTATTACAC
ATGACCTTGGTGTTGTTGCTGGAATGGCAGATCGTGTTGCTGTCATGTATGCTGGAAAAATTGTTGAATATGGAACGGTT
GATGAAGTATTTTACCACCCGCAGCACCCTTATACCTGGGGATTGCTCAATTCGATGCCAACAACAGCTACTGCAGCAGG
TAGCTTGAGGTCTATTCCCGGAACGCCACCAGATTTATTAAACCCTCCAAAGGGTGATGCATTTGCTGCCCGGAATGAGT
TTGCCCTAGACATTGACCATATCAAAGAGCCTCCAATGTTCAAGGTAAGTGACAGCCACTACGCAGCAACCTGGCTGCTA
GATGAGCGCGCTCCTAAAATAACCCCTCCATTCCCAATCCGCAAGCGTTGGGCAAAATGGCAGGAAATGGAAGAGAGGAA
GGCTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

3D structure

• AlphaFold DB: B4U0X1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.539	99.713	0.793
amiE	Streptococcus salivarius strain HSISS4	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMG 18311	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMD-9	56.325	95.402	0.537