Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQL37_RS02460 Genome accession   NZ_LS483352
Coordinates   442670..443479 (+) Length   269 a.a.
NCBI ID   WP_023612763.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12052     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 437670..448479
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL37_RS02440 (NCTC12052_00477) - 438112..439359 (+) 1248 WP_038432850.1 AMP-binding protein -
  DQL37_RS02445 (NCTC12052_00478) - 439415..440449 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  DQL37_RS02450 (NCTC12052_00479) vicR 440611..441321 (+) 711 WP_002985645.1 response regulator YycF Regulator
  DQL37_RS02455 (NCTC12052_00480) vicK 441314..442666 (+) 1353 WP_111685688.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQL37_RS02460 (NCTC12052_00481) vicX 442670..443479 (+) 810 WP_023612763.1 MBL fold metallo-hydrolase Regulator
  DQL37_RS02465 (NCTC12052_00482) rnc 443911..444603 (+) 693 WP_002985639.1 ribonuclease III -
  DQL37_RS02470 (NCTC12052_00483) smc 444604..448143 (+) 3540 WP_111685689.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30081.18 Da        Isoelectric Point: 5.5314

>NTDB_id=1138044 DQL37_RS02460 WP_023612763.1 442670..443479(+) (vicX) [Streptococcus pyogenes strain NCTC12052]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1138044 DQL37_RS02460 WP_023612763.1 442670..443479(+) (vicX) [Streptococcus pyogenes strain NCTC12052]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
GTCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762

Multiple sequence alignment