Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   DQM42_RS08960 Genome accession   NZ_LS483351
Coordinates   1693126..1694385 (-) Length   419 a.a.
NCBI ID   WP_002982609.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8195     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1688126..1699385
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM42_RS08955 (NCTC8195_01790) - 1691072..1692928 (-) 1857 WP_002982610.1 proline--tRNA ligase -
  DQM42_RS08960 (NCTC8195_01791) eeP 1693126..1694385 (-) 1260 WP_002982609.1 RIP metalloprotease RseP Regulator
  DQM42_RS08965 (NCTC8195_01792) - 1694458..1695252 (-) 795 WP_002982606.1 phosphatidate cytidylyltransferase -
  DQM42_RS08970 (NCTC8195_01793) - 1695265..1696014 (-) 750 WP_002982598.1 isoprenyl transferase -
  DQM42_RS08975 (NCTC8195_01794) - 1696086..1697084 (-) 999 WP_111690679.1 IS30-like element IS1239 family transposase -
  DQM42_RS08980 (NCTC8195_01795) yajC 1697319..1697678 (-) 360 WP_002982594.1 preprotein translocase subunit YajC -
  DQM42_RS08985 (NCTC8195_01796) - 1697794..1698168 (-) 375 WP_002982591.1 thioredoxin domain-containing protein -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45765.55 Da        Isoelectric Point: 9.0236

>NTDB_id=1138010 DQM42_RS08960 WP_002982609.1 1693126..1694385(-) (eeP) [Streptococcus pyogenes strain NCTC8195]
MLGIITFIIIFGILVIVHEFGHFYFAKKSCILVREFAIGMGPKIFSHVDQGGTLYTLRMLPLGGYVRMAGWGDDKTEIKT
GTPASLTLNEQGFVKRINLSQSKLDPTSLPMHVTGYDLEDQLSITGLVLEETKTYKVAHDATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILLVFLQGGMPDFSSNHVRVQENGAAAKAGLRDNDQIVAINGYKVTSWNDLTE
AVDLATRDLGPSQTIKVTYKSHQRLKTVAVKPQKHAKTYTIGVKASLKTGFKDKLLGGLELAWSGAFTILNALKGLITGF
SLNKLGGPVAMYDMSNQAAQNGLESVLSLMAMLSINLGIFNLIPIPALDGGKILMNIIEAIRRKPIKQETEAYITLAGVA
IMVVLMIAVTWNDIMRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=1138010 DQM42_RS08960 WP_002982609.1 1693126..1694385(-) (eeP) [Streptococcus pyogenes strain NCTC8195]
ATGTTAGGAATAATAACCTTTATTATTATTTTTGGTATTTTAGTGATTGTCCATGAATTTGGACATTTCTATTTTGCTAA
AAAATCATGCATTCTAGTAAGAGAATTTGCCATTGGAATGGGTCCTAAAATTTTTTCTCATGTTGACCAAGGAGGAACTC
TTTATACCTTGAGGATGTTACCCTTGGGCGGTTATGTGCGAATGGCTGGTTGGGGTGATGACAAAACTGAGATCAAAACA
GGTACTCCAGCAAGTTTAACCCTTAATGAGCAAGGTTTTGTTAAGCGCATCAACTTGTCTCAAAGTAAGTTAGACCCAAC
GAGTCTCCCAATGCATGTTACAGGCTATGACTTAGAAGATCAGCTGAGTATTACTGGCTTGGTTTTAGAAGAAACCAAGA
CATATAAGGTCGCTCACGATGCTACTATTGTTGAAGAAGACGGTACTGAGATAAGAATTGCTCCGCTTGATGTTCAATAT
CAAAATGCTAGTATTGGCGGACGTTTAATCACCAATTTTGCAGGTCCCATGAATAATTTTATTTTAGGGATTGTGGTTTT
TATCCTCTTGGTCTTTTTACAAGGTGGGATGCCAGATTTTAGTAGCAATCATGTCCGTGTTCAAGAAAATGGAGCAGCAG
CTAAGGCTGGTCTTCGAGATAATGACCAAATTGTCGCAATTAATGGTTATAAGGTGACTAGCTGGAATGATCTCACTGAG
GCTGTAGACCTTGCAACACGGGATCTAGGCCCGTCACAGACCATTAAGGTCACCTACAAGTCACATCAGCGCTTAAAAAC
GGTGGCTGTGAAACCACAAAAGCATGCAAAGACATACACGATAGGAGTTAAGGCGAGTCTGAAAACAGGATTTAAGGATA
AGCTCTTAGGCGGTCTAGAATTAGCTTGGAGTGGGGCGTTTACTATTTTGAATGCTTTGAAAGGATTGATCACTGGCTTT
AGTCTCAATAAATTAGGTGGACCTGTTGCCATGTATGACATGTCCAATCAGGCTGCTCAAAACGGCTTAGAGTCAGTCTT
ATCTCTTATGGCAATGCTTTCGATCAATTTAGGGATCTTTAACCTGATTCCGATTCCTGCACTTGATGGGGGAAAAATCT
TGATGAATATCATTGAAGCCATTCGTCGCAAGCCTATCAAGCAAGAAACAGAGGCCTATATCACCCTAGCTGGGGTTGCT
ATCATGGTCGTATTGATGATTGCTGTGACATGGAATGATATCATGCGCGTCTTTTTCTAA

Domains


Predicted by InterproScan.

(6-405)

(206-271)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

68.333

100

0.685

  eeP Streptococcus thermophilus LMD-9

68.095

100

0.683


Multiple sequence alignment