Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   DQM59_RS10335 Genome accession   NZ_LS483349
Coordinates   2018372..2019142 (+) Length   256 a.a.
NCBI ID   WP_002269456.1    Uniprot ID   -
Organism   Streptococcus mutans strain NCTC10449     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2013372..2024142
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM59_RS10320 (NCTC10449_01996) - 2015007..2015669 (-) 663 WP_002262652.1 YoaK family protein -
  DQM59_RS10325 (NCTC10449_01997) rlmH 2016012..2016491 (-) 480 WP_002262651.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DQM59_RS10330 (NCTC10449_01998) htrA 2016697..2017905 (+) 1209 WP_002262650.1 S1C family serine protease Regulator
  DQM59_RS10335 (NCTC10449_01999) spo0J 2018372..2019142 (+) 771 WP_002269456.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 256 a.a.        Molecular weight: 29492.16 Da        Isoelectric Point: 10.1578

>NTDB_id=1137921 DQM59_RS10335 WP_002269456.1 2018372..2019142(+) (spo0J) [Streptococcus mutans strain NCTC10449]
MTEQLKYLNTKDINPNPYQPRLQFKTKELEELAQSIKENGLIQPIIVRKSDIFGYDLVAGERRLKAAKLAGLNKIPVIIK
KISDDDSMKQAIIENLQRSDLNPIEEAKAYQNLINRNHMTHDDIAKVIGKSRPYITNSIRLLNLPLHISQALEKGLISQG
HARLLLSVEKQDLQDKWFQKILTEQLSVHQIERALKSQTKKEKKPSKDIFLAEKEKELSQSLGLPVVIHYNKKHQGQLKI
SFSSEEDFNRLMNKLN

Nucleotide


Download         Length: 771 bp        

>NTDB_id=1137921 DQM59_RS10335 WP_002269456.1 2018372..2019142(+) (spo0J) [Streptococcus mutans strain NCTC10449]
ATGACTGAACAATTAAAATATCTTAATACTAAAGATATTAATCCAAATCCCTATCAACCTCGACTGCAATTTAAAACTAA
AGAATTGGAAGAGTTAGCACAATCTATTAAAGAAAATGGCTTAATTCAACCCATTATTGTTCGAAAATCTGATATTTTTG
GCTACGATTTGGTTGCAGGAGAAAGGCGCTTAAAAGCAGCAAAATTAGCTGGATTAAATAAGATTCCTGTTATTATCAAA
AAAATTTCTGATGATGACAGTATGAAGCAAGCTATTATCGAAAATTTACAACGTTCTGATCTTAATCCTATTGAAGAAGC
CAAAGCTTACCAAAATCTCATTAATAGAAATCATATGACTCATGATGATATTGCTAAAGTAATTGGAAAATCAAGACCAT
ATATTACTAACAGTATCAGATTGTTAAATCTTCCTCTGCACATCAGCCAAGCTCTTGAAAAAGGTCTAATTTCTCAAGGA
CACGCACGACTTCTTTTAAGTGTAGAAAAGCAAGACTTACAAGATAAATGGTTCCAAAAAATTCTTACTGAACAGTTAAG
TGTGCATCAAATTGAAAGAGCACTTAAAAGTCAAACAAAGAAAGAAAAAAAACCTTCAAAAGACATTTTTCTGGCAGAAA
AAGAAAAAGAGCTAAGTCAATCATTAGGCTTACCTGTTGTTATTCATTATAATAAAAAACATCAAGGTCAACTTAAAATT
TCTTTTTCGTCCGAAGAAGACTTCAACAGATTAATGAACAAGTTAAACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

99.219

100

0.992


Multiple sequence alignment