Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   DQL21_RS05345 Genome accession   NZ_LS483343
Coordinates   1028616..1030373 (-) Length   585 a.a.
NCBI ID   WP_018029917.1    Uniprot ID   A0A2X3Y128
Organism   Streptococcus ferus strain NCTC12278     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1023616..1035373
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL21_RS05315 (NCTC12278_01056) - 1024531..1025232 (-) 702 WP_018029912.1 response regulator transcription factor -
  DQL21_RS05320 (NCTC12278_01057) - 1025229..1025858 (-) 630 WP_018029913.1 GTP pyrophosphokinase family protein -
  DQL21_RS05325 (NCTC12278_01058) - 1025962..1026087 (-) 126 Protein_995 lipid hydroperoxide peroxidase -
  DQL21_RS05330 (NCTC12278_01059) - 1026132..1027391 (-) 1260 WP_111703016.1 Mbeg1-like protein -
  DQL21_RS05335 (NCTC12278_01060) - 1027394..1027792 (-) 399 WP_018029915.1 DUF1310 family protein -
  DQL21_RS05340 (NCTC12278_01061) tpx 1027941..1028420 (-) 480 WP_018029916.1 thiol peroxidase -
  DQL21_RS05345 (NCTC12278_01062) rcrQ 1028616..1030373 (-) 1758 WP_018029917.1 ABC transporter ATP-binding protein Regulator
  DQL21_RS05350 (NCTC12278_01063) rcrP 1030363..1032165 (-) 1803 WP_018029918.1 ABC transporter ATP-binding protein Regulator
  DQL21_RS05355 (NCTC12278_01064) - 1032149..1032613 (-) 465 WP_018029919.1 MarR family winged helix-turn-helix transcriptional regulator -
  DQL21_RS05360 - 1032788..1033126 (-) 339 WP_111703017.1 GNAT family N-acetyltransferase -
  DQL21_RS05365 (NCTC12278_01067) gdhA 1033474..1034823 (-) 1350 WP_018029922.1 NADP-specific glutamate dehydrogenase -
  DQL21_RS05370 (NCTC12278_01068) - 1034962..1035333 (-) 372 WP_018029923.1 VOC family protein -

Sequence

Protein


Download         Length: 585 a.a.        Molecular weight: 64554.32 Da        Isoelectric Point: 5.2368

>NTDB_id=1137601 DQL21_RS05345 WP_018029917.1 1028616..1030373(-) (rcrQ) [Streptococcus ferus strain NCTC12278]
MKTKKTRSLLGQMAPYLKGYKAAFGLALIFTAISSVITVLGPDRLKEMTDTITKGLQGTIDLDKIASIALTLAMLYIGGA
LVSYIASFIVSTLIQQFSQRLRNAIADKINRVPLRYFDSHSQGDTLSRVTNDVDLMTQSFNQSLVTMTSSIVLLIGSVFM
MIKTNGSLAATAIISVFAGFALSSIIMVRSQPLFKRQQANLAEISGFVEEIYSGHNVVSSYNARQQSKDTFESLNQKLYA
SMWKSQFFSGIMMPMMQFIGNFGYVMVCIVGASLAIEGDITIGTIVAFMTYVRIFTQPISQIAQGITQLQSANAAMGRVF
EFLGEEEMEAEDQKSQQLDKVEGLVDFENVSFGYDPNKTIIHDFTAQAKPGQKVAIVGPTGAGKTTIVNLLMRFYEIDTG
KIAIDGVNIHDMKREEVHDAFSMVLQDTWLFEGTVKENLIFNQEGISDDQVERAAKAVGVHHFIKTLPQGYDTVLDDSVS
LSVGQKQLMTIARALLKNAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQG
NHEELMAQNGFYADLYNSQFTEEAA

Nucleotide


Download         Length: 1758 bp        

>NTDB_id=1137601 DQL21_RS05345 WP_018029917.1 1028616..1030373(-) (rcrQ) [Streptococcus ferus strain NCTC12278]
ATGAAAACTAAAAAGACAAGATCACTATTAGGTCAGATGGCTCCTTACTTAAAGGGTTACAAGGCAGCTTTTGGCCTGGC
CCTTATCTTTACGGCGATTTCAAGTGTTATTACTGTTCTGGGACCAGACCGTCTTAAGGAGATGACCGATACCATTACAA
AAGGGCTTCAAGGCACAATTGATCTGGACAAAATTGCCAGTATTGCCTTGACCTTGGCCATGCTCTACATTGGTGGCGCC
CTTGTTTCTTATATTGCTAGCTTCATTGTATCAACTCTGATTCAACAGTTTTCACAACGGCTGCGAAATGCCATTGCCGA
TAAAATCAATAGGGTTCCGCTTCGCTACTTTGACAGCCATTCTCAAGGGGATACGCTGTCGCGGGTAACCAACGATGTGG
ATTTGATGACCCAGTCTTTCAACCAAAGTTTGGTCACCATGACCTCCTCTATTGTCCTTTTGATTGGCTCTGTTTTCATG
ATGATTAAGACAAATGGCAGTCTGGCAGCAACAGCAATTATTTCTGTTTTTGCCGGCTTTGCCCTTAGCAGTATTATCAT
GGTGAGAAGTCAGCCTCTCTTTAAGCGTCAGCAGGCTAATCTTGCTGAAATCAGCGGTTTTGTGGAGGAAATTTATTCAG
GTCATAACGTGGTTAGCAGTTACAATGCCCGTCAGCAAAGCAAGGATACATTTGAGTCTCTTAATCAGAAGCTTTACGCC
AGTATGTGGAAGTCTCAATTCTTTTCAGGTATTATGATGCCCATGATGCAGTTCATCGGAAATTTTGGCTATGTTATGGT
TTGTATTGTTGGTGCCAGTCTGGCGATTGAGGGGGATATTACCATTGGGACGATTGTAGCCTTTATGACTTATGTTCGTA
TTTTCACTCAACCAATTTCTCAGATTGCTCAAGGGATTACCCAGTTGCAGTCGGCCAATGCTGCTATGGGACGTGTGTTT
GAATTCCTAGGAGAGGAAGAAATGGAAGCAGAGGATCAAAAAAGTCAGCAGCTTGACAAGGTGGAAGGTCTGGTTGACTT
TGAGAATGTTTCCTTTGGCTATGATCCGAACAAAACCATTATTCACGACTTTACCGCTCAGGCTAAGCCTGGTCAGAAAG
TTGCGATTGTCGGTCCAACGGGAGCCGGTAAGACCACTATCGTCAATCTGTTAATGCGCTTTTATGAGATTGATACCGGT
AAAATCGCGATTGATGGGGTCAATATTCATGACATGAAGCGCGAAGAAGTACATGATGCCTTTTCAATGGTACTTCAGGA
TACCTGGCTTTTTGAAGGAACGGTCAAAGAGAATTTAATCTTTAATCAAGAAGGTATCAGTGATGATCAAGTGGAAAGGG
CGGCGAAGGCTGTCGGAGTACATCATTTCATCAAGACCCTTCCTCAGGGCTATGATACGGTCTTGGATGATTCGGTTAGC
TTATCAGTTGGTCAGAAACAGTTAATGACGATTGCCCGTGCCTTGCTGAAAAACGCTCCTTTACTGATTTTGGATGAAGC
GACTTCTTCGGTTGATACGAGAACGGAAGAATTGATTCAAAAAGCCATGGATAAACTGATGGAAGGACGTACCTCCTTTG
TCATTGCCCACCGCCTGTCGACTATCAGAAACGCTGATTTAATCCTTGTCATGAAAGACGGTAATATCATTGAACAGGGA
AATCATGAAGAGCTGATGGCTCAGAACGGTTTTTATGCTGACTTGTATAATAGTCAGTTTACAGAAGAGGCAGCCTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(362-509)

ABC transporter transmembrane region (ABC_membrane)

(25-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2X3Y128

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

83.477

99.316

0.829

Multiple sequence alignment