Detailed information NTG1137592

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: DQL21_RS03370
• Genome accession: NZ_LS483343
• Coordinates: 642774..643652 (+)
• Length: 292 a.a.
• NCBI ID: WP_018029523.1
• Uniprot ID: -
• Organism: Streptococcus ferus strain NCTC12278
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 637774..648652

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL21_RS03340 (NCTC12278_00655)	-	638108..638986 (+)	879	WP_018029517.1	F0F1 ATP synthase subunit gamma	-
DQL21_RS03345 (NCTC12278_00656)	atpD	639008..640414 (+)	1407	WP_018029518.1	F0F1 ATP synthase subunit beta	-
DQL21_RS03350 (NCTC12278_00657)	-	640427..640846 (+)	420	WP_018029519.1	F0F1 ATP synthase subunit epsilon	-
DQL21_RS03355 (NCTC12278_00658)	-	640990..641226 (+)	237	WP_026161857.1	DUF1146 family protein	-
DQL21_RS03360 (NCTC12278_00659)	murA	641271..642542 (+)	1272	WP_018029521.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
DQL21_RS03365 (NCTC12278_00660)	-	642545..642733 (+)	189	WP_018029522.1	DNA-directed RNA polymerase subunit beta	-
DQL21_RS03370 (NCTC12278_00661)	endA	642774..643652 (+)	879	WP_018029523.1	DNA/RNA non-specific endonuclease	Machinery gene
DQL21_RS03375 (NCTC12278_00662)	-	643686..644336 (-)	651	WP_018029524.1	amino acid ABC transporter permease	-
DQL21_RS03380 (NCTC12278_00663)	-	644351..645055 (-)	705	WP_018029525.1	amino acid ABC transporter permease	-
DQL21_RS03385 (NCTC12278_00664)	-	645073..645888 (-)	816	WP_018029526.1	transporter substrate-binding domain-containing protein	-
DQL21_RS03390 (NCTC12278_00665)	-	645885..646667 (-)	783	WP_018029527.1	amino acid ABC transporter ATP-binding protein	-
DQL21_RS03395 (NCTC12278_00666)	vicR	646923..647630 (+)	708	WP_018029528.1	response regulator YycF	Regulator

Sequence

Protein

• Length: 292 a.a.
• Molecular weight: 31952.69 Da
• Isoelectric Point: 9.9030

>NTDB_id=1137592 DQL21_RS03370 WP_018029523.1 642774..643652(+) (endA) [Streptococcus ferus strain NCTC12278]
MARKKLGKKDHQLVYSVVVALLILGLGYLATSNHLEDSNPFKQAAQLLTGKEEEVAIASNGSSSYDETPSQALAESVLTA
KVRQKLGSQIEWTGAGSFIINGNKTALNADVSSLPYATNQTKTVRGRRIPVLANALLTKATRQYRNRNETGQGSNTYRPP
GWHQLQDLSGVYDHAVDRGHLLGYALVGGLKGFDASTSNPDNIATQTAWSNQADSSQSRGQNYYESMVRRALDKHQKVRY
RVRLIYDGDNLLASGSQIEAKSADGSLEFNVFIPNVQSGLTFDYKTGQVRKN

Nucleotide

• Length: 879 bp

>NTDB_id=1137592 DQL21_RS03370 WP_018029523.1 642774..643652(+) (endA) [Streptococcus ferus strain NCTC12278]
ATGGCGAGAAAAAAACTGGGAAAAAAGGATCATCAGTTAGTGTACTCGGTAGTGGTTGCGCTGTTGATTTTAGGATTGGG
TTATTTAGCAACCAGCAATCATTTAGAGGACAGTAATCCCTTTAAACAAGCAGCACAATTATTAACGGGTAAGGAAGAAG
AGGTTGCGATTGCTTCCAATGGTTCCAGCAGCTACGATGAGACACCAAGTCAGGCACTGGCAGAAAGTGTATTGACTGCA
AAGGTCAGACAAAAGCTGGGCAGCCAAATTGAGTGGACAGGGGCAGGTTCTTTTATTATCAATGGCAATAAAACAGCCCT
TAACGCAGATGTCTCCAGTCTGCCTTATGCGACGAATCAAACAAAGACAGTCAGAGGAAGACGGATTCCCGTGCTTGCCA
ATGCGCTTTTGACCAAAGCAACTCGGCAATATCGGAACCGCAACGAAACGGGTCAGGGAAGCAACACTTATCGACCTCCA
GGCTGGCACCAGCTGCAGGACTTATCTGGAGTCTACGATCACGCTGTCGATCGGGGTCACCTGCTGGGATATGCCTTGGT
AGGAGGACTTAAAGGCTTTGATGCCTCAACCAGTAATCCTGATAACATTGCAACTCAGACGGCTTGGTCCAATCAGGCAG
ACAGCAGCCAGTCTCGGGGACAAAACTACTATGAAAGCATGGTTCGTAGAGCCTTGGATAAGCATCAAAAAGTTCGCTAT
CGGGTGAGACTGATTTACGATGGAGATAACCTCTTGGCGAGTGGCAGCCAGATAGAGGCTAAATCGGCTGACGGCAGTTT
GGAGTTTAATGTTTTTATTCCTAACGTGCAGAGTGGGCTCACTTTCGATTACAAAACAGGACAGGTCAGAAAAAATTAA

Domains

Predicted by InterProScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (97-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	65.625	76.712	0.503
endA	Streptococcus pneumoniae D39	65.625	76.712	0.503
endA	Streptococcus pneumoniae R6	65.625	76.712	0.503
endA	Streptococcus pneumoniae TIGR4	65.625	76.712	0.503