Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   DQL34_RS01430 Genome accession   NZ_LS483339
Coordinates   263533..264795 (+) Length   420 a.a.
NCBI ID   WP_111679198.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain NCTC12958     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 258533..269795
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL34_RS01405 (NCTC12958_00302) - 259113..260462 (+) 1350 WP_111679196.1 glucose-6-phosphate isomerase -
  DQL34_RS01410 (NCTC12958_00303) - 260651..261367 (+) 717 WP_002949309.1 YebC/PmpR family DNA-binding transcriptional regulator -
  DQL34_RS01415 (NCTC12958_00304) - 261493..261831 (+) 339 WP_071417509.1 preprotein translocase subunit YajC -
  DQL34_RS01420 (NCTC12958_00305) - 261960..262709 (+) 750 WP_024009716.1 isoprenyl transferase -
  DQL34_RS01425 (NCTC12958_00306) - 262722..263516 (+) 795 WP_071417510.1 phosphatidate cytidylyltransferase -
  DQL34_RS01430 (NCTC12958_00307) eeP 263533..264795 (+) 1263 WP_111679198.1 RIP metalloprotease RseP Regulator
  DQL34_RS01435 (NCTC12958_00308) - 264866..266728 (+) 1863 WP_111679200.1 proline--tRNA ligase -
  DQL34_RS01440 (NCTC12958_00309) - 267344..269284 (+) 1941 WP_111679201.1 ABC transporter substrate binding protein -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45665.06 Da        Isoelectric Point: 6.1568

>NTDB_id=1137342 DQL34_RS01430 WP_111679198.1 263533..264795(+) (eeP) [Streptococcus thermophilus strain NCTC12958]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKT
GSPASLTLGKDGKVRRINLSDRQVDQTALPMNVTAYDLEDKLTITGLVLGETKTYEVDHDATIVEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDTSTNLIQVANGGAAQVSGLKTGDAIVDINKDKVTDWDSLKE
ALRENTQKFSKGDSLSVTVKRSNGQEETISVKPQESQGSYFLGVSPVLKTGLKDKIFGGFQMAWEGATAILATLKGLITN
FSLNKLGGPVAMFQMSAQASESGLISILDLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGV
AVMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=1137342 DQL34_RS01430 WP_111679198.1 263533..264795(+) (eeP) [Streptococcus thermophilus strain NCTC12958]
ATGAAAGCTATTATTACTTTTTTACTGATTTTCTGTGTGATTGTCGTCTTCCATGAGTTTGGCCATTTCTTCTTTGCCAA
ACGATCAGGCATTCTGGTGCGTGAATTTGCCATTGGGATGGGTCCTAAAATTTTTGCACACACTGGTAAGGATGGTACCG
TTTATACTATTCGTATCCTTCCTTTGGGTGGTTATGTGCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAACG
GGGAGTCCTGCTAGCCTAACGCTTGGAAAAGATGGCAAAGTGAGACGTATCAATCTTTCAGATCGTCAGGTTGACCAGAC
GGCTTTGCCTATGAACGTTACTGCCTATGATTTGGAAGATAAGTTAACTATTACAGGTCTTGTCCTAGGTGAGACCAAGA
CCTATGAGGTTGACCATGATGCCACTATCGTTGAGGAAGACGGTACGGAGCTTCGTATTGCTCCTAAAGATGTCCAATAT
CAAAATGCTAGCATTTGGGGACGTTTAATTACCAATTTTGCTGGTCCTATGAACAACTTTATTCTTGGGGTCTTGGTCTT
TATTATCCTTGCCTTTGTTCAAGGTGGTGTTCAAGATACGTCGACCAACCTTATCCAGGTGGCTAATGGTGGTGCTGCCC
AGGTGTCAGGTTTGAAAACTGGTGATGCCATCGTGGACATTAACAAGGACAAGGTTACTGACTGGGACAGCTTGAAAGAA
GCGTTGAGAGAGAATACCCAAAAATTCTCGAAAGGCGACAGCCTTTCTGTGACGGTTAAGAGAAGTAATGGTCAGGAAGA
AACTATTTCTGTTAAACCCCAAGAGAGCCAAGGGAGCTACTTTTTAGGTGTCTCTCCTGTCTTAAAGACAGGTCTTAAAG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGTGCGACGGCAATCCTCGCTACGCTCAAAGGGCTCATTACCAAC
TTTAGCTTGAACAAGCTTGGTGGACCGGTTGCTATGTTCCAGATGTCTGCACAAGCCTCTGAAAGTGGGTTAATTTCCAT
TCTTGACCTTATGGGAATGCTCTCTATCAACTTAGGGATTTTCAATCTTATTCCAATTCCAGCCCTTGACGGTGGTAAAA
TTGTTATGAATATTATTGAAGCTATTCGTCGTAAACCACTTAATCAAGAAATTGAAAGCTATATCACACTCGCAGGTGTT
GCGGTCATGGTTGTCCTTATGATTGCAGTAACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains


Predicted by InterproScan.

(6-406)

(204-272)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

99.762

100

0.998

  eeP Streptococcus thermophilus LMG 18311

99.524

100

0.995


Multiple sequence alignment