Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   DQM35_RS07955 Genome accession   NZ_LS483338
Coordinates   1542548..1543807 (-) Length   419 a.a.
NCBI ID   WP_038431604.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12064     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1537548..1548807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM35_RS07950 (NCTC12064_01567) - 1540494..1542350 (-) 1857 WP_011184986.1 proline--tRNA ligase -
  DQM35_RS07955 (NCTC12064_01568) eeP 1542548..1543807 (-) 1260 WP_038431604.1 RIP metalloprotease RseP Regulator
  DQM35_RS07960 (NCTC12064_01569) - 1543880..1544674 (-) 795 WP_038431605.1 phosphatidate cytidylyltransferase -
  DQM35_RS07965 (NCTC12064_01570) - 1544687..1545436 (-) 750 WP_002988029.1 isoprenyl transferase -
  DQM35_RS07970 (NCTC12064_01571) yajC 1545655..1546020 (-) 366 WP_002988027.1 preprotein translocase subunit YajC -
  DQM35_RS07975 (NCTC12064_01572) - 1546136..1546510 (-) 375 WP_002982591.1 thioredoxin domain-containing protein -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 45704.45 Da        Isoelectric Point: 9.4314

>NTDB_id=1137324 DQM35_RS07955 WP_038431604.1 1542548..1543807(-) (eeP) [Streptococcus pyogenes strain NCTC12064]
MLGIITFIIIFGILVIVHEFGHFYFAKKSGILVREFAIGMGPKIFSHVDQGGTLYTLRMLPLGGYVRMAGWGDDKTEIKT
GTPASLTLNEQGFVKRINLSQSKLDPTSLPMHVTGYDLEDQLSITGLVLDETKTYKVAHDATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILLVFLQGGMPDFSSNHVRVQENGAAAKAGLRDNDQIVAINGYKVTSWNDLTE
AVNLATRDLGPSQTIKVTYKSHQRLKTVAVKPQKHAKTYTIGVKASLKTGFKDKLLGGLELAWSGAFTILNALKGLITGF
SLNKLGGPVAMYDMSNQAAQNGLESVLSLMAMLSINLGIFNLIPIPALDGGKILMNIIEAIRRKPIKQETEAYITLAGVA
IMVVLMIAVTWNDIMRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=1137324 DQM35_RS07955 WP_038431604.1 1542548..1543807(-) (eeP) [Streptococcus pyogenes strain NCTC12064]
ATGTTAGGAATAATAACCTTTATTATTATTTTTGGTATTTTAGTGATTGTCCATGAATTTGGACATTTCTATTTTGCTAA
AAAATCAGGCATTCTAGTAAGAGAATTTGCCATTGGAATGGGCCCTAAAATTTTTTCTCATGTTGACCAAGGAGGAACTC
TTTATACCTTGAGGATGTTACCCTTGGGTGGTTATGTGCGAATGGCTGGTTGGGGTGATGACAAAACTGAGATCAAAACA
GGTACTCCAGCAAGTTTAACCCTTAATGAGCAAGGTTTTGTTAAGCGCATCAACTTGTCTCAAAGTAAGTTAGACCCAAC
GAGTCTCCCAATGCATGTTACAGGCTATGACTTAGAAGATCAGCTGAGTATTACTGGCTTGGTTTTAGATGAAACCAAGA
CATATAAGGTCGCTCACGATGCTACTATTGTTGAAGAAGACGGTACTGAGATAAGAATTGCTCCGCTTGATGTTCAATAT
CAAAATGCTAGTATTGGCGGACGTTTAATCACCAATTTTGCAGGTCCCATGAATAATTTTATTTTAGGGATTGTGGTTTT
TATCCTCTTGGTCTTTTTACAAGGTGGGATGCCAGATTTTAGTAGCAATCATGTCCGTGTTCAAGAAAATGGAGCAGCAG
CTAAGGCTGGTCTTCGAGATAATGACCAAATTGTCGCAATTAATGGTTATAAGGTGACTAGCTGGAATGATCTCACTGAG
GCTGTAAACCTTGCAACACGGGATCTAGGCCCGTCACAGACCATTAAGGTCACCTACAAGTCACATCAGCGCTTAAAAAC
GGTGGCTGTGAAACCACAAAAGCATGCAAAGACATACACGATAGGAGTTAAGGCGAGTCTGAAAACAGGATTTAAGGATA
AGCTCTTAGGCGGTCTAGAATTAGCTTGGAGTGGGGCGTTTACTATTTTGAATGCTTTGAAAGGATTGATCACTGGCTTT
AGTCTCAATAAATTAGGTGGACCTGTTGCCATGTATGACATGTCCAATCAGGCTGCTCAAAACGGCTTAGAGTCAGTCTT
ATCTCTTATGGCAATGCTTTCGATCAATTTAGGGATCTTTAACCTGATTCCGATTCCTGCACTTGATGGGGGAAAAATCT
TGATGAATATCATTGAAGCCATTCGTCGCAAGCCTATCAAGCAAGAAACAGAGGCCTATATCACCCTAGCTGGGGTTGCT
ATCATGGTCGTATTGATGATTGCTGTGACATGGAATGATATCATGCGCGTCTTTTTCTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(206-271)

Peptidase family M50 (Peptidase_M50)

(6-405)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

68.571

100

0.687
  eeP Streptococcus thermophilus LMD-9

68.333

100

0.685

Multiple sequence alignment