Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   DQL08_RS08570 Genome accession   NZ_LS483336
Coordinates   1652020..1653279 (-) Length   419 a.a.
NCBI ID   WP_002982609.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12046     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1647020..1658279
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL08_RS08565 (NCTC12046_01702) - 1649966..1651822 (-) 1857 WP_009880419.1 proline--tRNA ligase -
  DQL08_RS08570 (NCTC12046_01703) eeP 1652020..1653279 (-) 1260 WP_002982609.1 RIP metalloprotease RseP Regulator
  DQL08_RS08575 (NCTC12046_01704) - 1653352..1654146 (-) 795 WP_002982606.1 phosphatidate cytidylyltransferase -
  DQL08_RS08580 (NCTC12046_01705) - 1654159..1654908 (-) 750 WP_010922683.1 isoprenyl transferase -
  DQL08_RS08585 (NCTC12046_01706) yajC 1655127..1655492 (-) 366 WP_011018246.1 preprotein translocase subunit YajC -
  DQL08_RS08590 (NCTC12046_01707) - 1655608..1655982 (-) 375 WP_011184989.1 thioredoxin domain-containing protein -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 45765.55 Da        Isoelectric Point: 9.0236

>NTDB_id=1137214 DQL08_RS08570 WP_002982609.1 1652020..1653279(-) (eeP) [Streptococcus pyogenes strain NCTC12046]
MLGIITFIIIFGILVIVHEFGHFYFAKKSCILVREFAIGMGPKIFSHVDQGGTLYTLRMLPLGGYVRMAGWGDDKTEIKT
GTPASLTLNEQGFVKRINLSQSKLDPTSLPMHVTGYDLEDQLSITGLVLEETKTYKVAHDATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILLVFLQGGMPDFSSNHVRVQENGAAAKAGLRDNDQIVAINGYKVTSWNDLTE
AVDLATRDLGPSQTIKVTYKSHQRLKTVAVKPQKHAKTYTIGVKASLKTGFKDKLLGGLELAWSGAFTILNALKGLITGF
SLNKLGGPVAMYDMSNQAAQNGLESVLSLMAMLSINLGIFNLIPIPALDGGKILMNIIEAIRRKPIKQETEAYITLAGVA
IMVVLMIAVTWNDIMRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=1137214 DQL08_RS08570 WP_002982609.1 1652020..1653279(-) (eeP) [Streptococcus pyogenes strain NCTC12046]
ATGTTAGGAATAATAACCTTTATTATTATTTTTGGTATTTTAGTGATTGTCCATGAATTTGGACATTTCTATTTTGCTAA
AAAATCATGCATTCTAGTAAGAGAATTTGCCATTGGAATGGGCCCTAAAATTTTTTCTCATGTTGACCAAGGAGGAACTC
TTTATACCTTGAGGATGTTACCCTTGGGCGGTTATGTGCGAATGGCTGGTTGGGGTGATGACAAAACTGAGATCAAAACA
GGTACTCCAGCAAGTTTAACCCTTAATGAGCAAGGTTTTGTTAAGCGCATCAACTTGTCTCAAAGTAAGTTAGACCCAAC
GAGTCTCCCAATGCATGTTACAGGCTATGACTTAGAAGATCAGCTGAGTATTACTGGCTTGGTTTTAGAAGAAACCAAGA
CATATAAGGTCGCTCACGATGCTACTATTGTTGAAGAAGACGGTACTGAGATAAGAATTGCCCCGCTTGATGTTCAATAT
CAAAATGCTAGTATTGGCGGCCGTTTAATCACCAATTTTGCAGGCCCCATGAATAATTTTATTTTAGGGATTGTGGTTTT
TATCCTCTTGGTCTTTTTACAAGGTGGGATGCCAGATTTTAGTAGCAATCATGTCCGTGTTCAAGAAAATGGAGCAGCAG
CTAAGGCTGGTCTTCGAGATAATGACCAAATTGTCGCAATTAATGGTTATAAGGTGACTAGCTGGAATGATCTCACTGAG
GCTGTAGACCTTGCAACACGGGATCTAGGCCCGTCACAGACCATTAAGGTCACCTACAAGTCACATCAGCGCTTAAAAAC
GGTGGCTGTGAAACCACAAAAGCATGCAAAGACATACACGATAGGAGTTAAGGCGAGTCTGAAAACAGGATTTAAGGATA
AGCTCTTAGGCGGTCTAGAATTAGCTTGGAGTGGGGCGTTTACTATTTTGAATGCTTTGAAAGGATTGATCACTGGCTTT
AGTCTCAATAAATTAGGTGGACCTGTTGCCATGTATGACATGTCCAATCAGGCTGCTCAAAACGGCTTAGAGTCAGTCTT
ATCTCTTATGGCAATGCTTTCGATCAATTTAGGGATCTTTAACCTGATTCCGATTCCTGCACTTGATGGGGGAAAAATCT
TGATGAATATCATTGAAGCCATTCGTCGCAAGCCTATCAAGCAAGAAACAGAGGCCTATATCACCCTAGCTGGGGTTGCT
ATCATGGTCGTATTGATGATTGCTGTGACATGGAATGATATCATGCGCGTCTTTTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-405)

PDZ domain (PDZ_2)

(206-271)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

68.333

100

0.685
  eeP Streptococcus thermophilus LMD-9

68.095

100

0.683

Multiple sequence alignment