Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   DQL30_RS08160 Genome accession   NZ_LS483333
Coordinates   1588258..1589517 (-) Length   419 a.a.
NCBI ID   WP_111713957.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12048     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1583258..1594517
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL30_RS08155 (NCTC12048_01621) - 1586204..1588060 (-) 1857 WP_111713956.1 proline--tRNA ligase -
  DQL30_RS08160 (NCTC12048_01622) eeP 1588258..1589517 (-) 1260 WP_111713957.1 RIP metalloprotease RseP Regulator
  DQL30_RS08165 (NCTC12048_01623) - 1589590..1590384 (-) 795 WP_002982606.1 phosphatidate cytidylyltransferase -
  DQL30_RS08170 (NCTC12048_01624) - 1590397..1591146 (-) 750 WP_010922683.1 isoprenyl transferase -
  DQL30_RS08175 (NCTC12048_01625) yajC 1591366..1591731 (-) 366 WP_002988027.1 preprotein translocase subunit YajC -
  DQL30_RS08180 (NCTC12048_01626) - 1591847..1592221 (-) 375 WP_010922685.1 thioredoxin domain-containing protein -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 45722.47 Da        Isoelectric Point: 9.4314

>NTDB_id=1137045 DQL30_RS08160 WP_111713957.1 1588258..1589517(-) (eeP) [Streptococcus pyogenes strain NCTC12048]
MLGIITFIIIFGILVIVHEFGHFYFAKKSGILVREFAIGMGPKIFSHVDQGGTLYTLRMLPLGGYVRMAGWGDDKTEIKT
GTPASLTLNEQGFVKRINLSQSKLDPTSLPMHVTGYDLEDQLSITGLVLEETKTYKVAHDATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILLVFLQGGMSDFSSNHIRVQENGAAAKAGLRDNDQIVAINGYKVTSWNDLTE
AVNLATRDLGPSQTIKVTYKSHQRLKTVAVKPQKHAKTYTIGVKASLKTGFKDKLLGGLELAWSGAFTILNALKGLITGF
SLNKLGGPVAMYDMSNQAAQNGLESVLSLMAMLSINLGIFNLIPIPALDGGKILMNIIEAIRRKPIKQETEAYITLAGVA
IMVVLMIAVTWNDIMRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=1137045 DQL30_RS08160 WP_111713957.1 1588258..1589517(-) (eeP) [Streptococcus pyogenes strain NCTC12048]
ATGTTAGGAATAATAACTTTTATTATTATTTTTGGTATTTTAGTGATTGTCCATGAATTTGGACATTTCTATTTTGCTAA
AAAATCAGGCATTCTAGTAAGAGAATTTGCCATTGGAATGGGCCCTAAAATTTTTTCTCATGTTGACCAAGGAGGAACTC
TTTATACCTTGAGGATGTTACCCTTGGGTGGTTATGTACGAATGGCTGGTTGGGGTGATGACAAAACTGAGATCAAAACA
GGTACTCCAGCAAGTTTAACCCTTAATGAGCAAGGTTTTGTTAAGCGCATCAACTTGTCTCAAAGTAAGTTAGACCCAAC
GAGTCTCCCAATGCATGTTACAGGCTATGACTTAGAAGATCAGCTGAGTATTACTGGCTTGGTTTTAGAAGAAACCAAGA
CATATAAGGTCGCTCACGATGCTACTATTGTTGAAGAAGACGGTACTGAGATAAGAATTGCTCCGCTTGATGTTCAATAT
CAAAATGCTAGTATTGGCGGACGTTTAATCACCAATTTTGCAGGTCCCATGAATAATTTTATTTTAGGGATTGTGGTTTT
TATCCTCTTGGTCTTTTTACAAGGTGGGATGTCAGATTTTAGTAGCAATCATATCCGTGTTCAAGAAAATGGAGCAGCAG
CTAAGGCTGGTCTTCGAGATAATGACCAAATTGTCGCAATTAATGGTTATAAGGTGACTAGCTGGAATGATCTCACTGAG
GCTGTAAACCTTGCAACACGGGATCTAGGCCCGTCACAGACCATTAAGGTCACCTACAAGTCACATCAGCGCTTAAAAAC
GGTGGCTGTGAAACCACAAAAGCATGCAAAGACATACACGATAGGAGTTAAGGCGAGTCTGAAAACAGGATTTAAGGATA
AGCTCTTAGGCGGTCTAGAATTAGCTTGGAGTGGGGCGTTTACTATTTTGAATGCTTTGAAAGGATTGATCACTGGCTTT
AGTCTCAATAAATTAGGTGGACCTGTTGCCATGTATGACATGTCCAATCAGGCTGCTCAAAACGGCTTAGAGTCAGTCTT
ATCTCTTATGGCAATGCTTTCGATCAATTTAGGGATCTTTAACCTGATTCCGATTCCTGCACTTGATGGGGGAAAAATCT
TGATGAATATCATTGAAGCCATTCGTCGCAAGCCTATCAAGCAAGAAACAGAGGCCTATATCACCCTAGCTGGGGTTGCT
ATCATGGTCGTATTGATGATTGCTGTGACATGGAATGATATCATGCGCGTCTTTTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-405)

PDZ domain (PDZ_2)

(206-271)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

68.81

100

0.69
  eeP Streptococcus thermophilus LMD-9

68.571

100

0.687

Multiple sequence alignment