Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   DQL47_RS09290 Genome accession   NZ_LS483328
Coordinates   1934743..1936008 (-) Length   421 a.a.
NCBI ID   WP_043039464.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC12090     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1929743..1941008
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL47_RS09280 (NCTC12090_01878) - 1932008..1932565 (-) 558 WP_021321164.1 nucleotidyltransferase family protein -
  DQL47_RS09285 (NCTC12090_01879) - 1932617..1934473 (-) 1857 WP_111690446.1 proline--tRNA ligase -
  DQL47_RS09290 (NCTC12090_01880) eeP 1934743..1936008 (-) 1266 WP_043039464.1 RIP metalloprotease RseP Regulator
  DQL47_RS09295 (NCTC12090_01881) - 1936040..1936834 (-) 795 WP_111690447.1 phosphatidate cytidylyltransferase -
  DQL47_RS09300 (NCTC12090_01882) - 1936844..1937593 (-) 750 WP_014623562.1 isoprenyl transferase -
  DQL47_RS09305 (NCTC12090_01883) yajC 1937767..1938126 (-) 360 WP_014623563.1 preprotein translocase subunit YajC -
  DQL47_RS09310 (NCTC12090_01884) traF 1938240..1938602 (-) 363 WP_042669908.1 conjugal transfer protein TraF -
  DQL47_RS09320 (NCTC12090_01885) - 1938711..1940330 (-) 1620 WP_111690449.1 glycoside hydrolase family 13 protein -

Sequence


Protein


Download         Length: 421 a.a.        Molecular weight: 45998.51 Da        Isoelectric Point: 5.9240

>NTDB_id=1136769 DQL47_RS09290 WP_043039464.1 1934743..1936008(-) (eeP) [Streptococcus equi subsp. zooepidemicus strain NCTC12090]
MLGIITFIIIFGILVIVHEFGHFYFAKRSGILVREFAIGMGPKLFSHVDQQGTLYTIRLLPLGGYVRMAGWGDDTTEIKT
GTPASLTLNDQGLVKRINLSQSKLDPTSLPMNVTAYDLEDKLTITGLVLDEIKTYSVDHDATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILFAFVQGGVADYHSNHIRVVENGAAAKAGIRDNDQILEINHQKINDWYELTQ
AVTDSAADVKAKGKLEITYQTGDQVKTIALKPEKKGDQYLIGVQYPLKTSLTDKLIGGFEMAGNGALVIVTALKSLITSF
SLDKLGGPVAMYQMSNQAAKNGLESVLSLMAMLSINLGIFNLIPIPALDGGKILMNVIEALRRKPLKQETETYITLAGVA
IMVVLMIAVTWNDIMRAFFQG

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=1136769 DQL47_RS09290 WP_043039464.1 1934743..1936008(-) (eeP) [Streptococcus equi subsp. zooepidemicus strain NCTC12090]
ATGTTAGGAATAATTACCTTTATTATTATTTTTGGTATTCTTGTGATCGTCCATGAGTTTGGCCATTTCTATTTTGCTAA
GCGGTCTGGTATTTTGGTCAGAGAATTTGCTATTGGCATGGGACCAAAACTCTTTTCGCATGTTGATCAGCAAGGAACGC
TTTACACGATTCGACTATTACCGCTTGGTGGCTATGTGCGAATGGCAGGCTGGGGTGATGACACGACTGAGATAAAAACA
GGAACACCTGCTAGCTTGACGCTTAATGATCAAGGCTTGGTCAAGCGGATTAACCTTTCTCAGAGCAAGCTTGATCCAAC
CAGCCTGCCTATGAATGTGACTGCTTATGACTTAGAAGATAAGTTGACGATTACAGGGCTGGTTCTTGATGAGATCAAGA
CCTATTCGGTAGACCATGACGCAACCATTGTCGAGGAGGACGGTACAGAGATCCGGATTGCGCCGCTTGATGTTCAGTAT
CAAAACGCAAGCATTGGCGGTCGTTTGATCACCAATTTTGCAGGACCTATGAATAACTTTATTCTAGGTATTGTTGTCTT
TATTTTGTTTGCCTTTGTTCAAGGTGGCGTGGCTGATTATCATAGCAACCATATTCGTGTGGTGGAAAATGGCGCAGCAG
CCAAGGCTGGTATTAGAGACAATGATCAGATTTTAGAGATTAATCATCAAAAGATTAATGACTGGTATGAGTTGACGCAG
GCCGTTACTGATTCAGCAGCAGATGTTAAGGCTAAGGGCAAGCTAGAGATTACCTATCAGACAGGTGATCAGGTTAAGAC
TATAGCACTGAAGCCTGAAAAAAAAGGCGATCAGTACCTTATTGGTGTCCAGTACCCACTAAAAACAAGTCTGACAGACA
AGCTAATAGGTGGCTTTGAGATGGCTGGTAATGGTGCTCTAGTGATTGTCACTGCTCTAAAGAGTTTGATTACCTCCTTT
AGCCTAGATAAATTAGGTGGGCCAGTTGCCATGTATCAGATGTCCAATCAGGCAGCAAAGAATGGTTTAGAGTCAGTCTT
GTCCTTGATGGCAATGCTCTCTATCAACTTAGGGATTTTCAATTTGATTCCGATTCCCGCACTAGATGGTGGTAAGATCC
TGATGAATGTGATTGAAGCACTTCGTCGTAAGCCATTAAAGCAAGAGACAGAGACTTATATTACCCTTGCAGGTGTTGCG
ATTATGGTGGTACTCATGATTGCAGTGACCTGGAACGATATTATGCGAGCCTTTTTCCAAGGCTGA

Domains


Predicted by InterproScan.

(6-405)

(206-237)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

68.095

99.762

0.679

  eeP Streptococcus thermophilus LMD-9

67.857

99.762

0.677


Multiple sequence alignment