Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQL47_RS07360 Genome accession   NZ_LS483328
Coordinates   1533729..1534538 (-) Length   269 a.a.
NCBI ID   WP_021320992.1    Uniprot ID   A0AAW3GKW3
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC12090     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1528729..1539538
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL47_RS07345 (NCTC12090_01486) rnc 1530384..1531076 (-) 693 WP_111690571.1 ribonuclease III -
  DQL47_RS07350 (NCTC12090_01487) - 1531335..1532849 (-) 1515 WP_021320991.1 helix-turn-helix domain-containing protein -
  DQL47_RS07360 (NCTC12090_01488) vicX 1533729..1534538 (-) 810 WP_021320992.1 MBL fold metallo-hydrolase Regulator
  DQL47_RS07365 (NCTC12090_01489) vicK 1534542..1535894 (-) 1353 WP_014623188.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQL47_RS07370 (NCTC12090_01490) vicR 1535887..1536597 (-) 711 WP_012515994.1 response regulator YycF Regulator
  DQL47_RS07375 (NCTC12090_01491) - 1536806..1537822 (-) 1017 WP_111690572.1 DUF3114 domain-containing protein -
  DQL47_RS07380 (NCTC12090_01492) - 1537868..1539130 (-) 1263 WP_111690290.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30011.07 Da        Isoelectric Point: 5.5344

>NTDB_id=1136749 DQL47_RS07360 WP_021320992.1 1533729..1534538(-) (vicX) [Streptococcus equi subsp. zooepidemicus strain NCTC12090]
MSEVGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRRPEDLDAILITHEHSDHIKGVGIMARKYNLD
VYANEKTWQMIDERHMIGNLDVTQKHVFERGKTMTFGDIDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRLAG
IIENADGYLIESNHDVEILRAGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGNKTKKIYLGHLSQENNIKELAHMTMVN
QLAMADLGVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1136749 DQL47_RS07360 WP_021320992.1 1533729..1534538(-) (vicX) [Streptococcus equi subsp. zooepidemicus strain NCTC12090]
ATGAGTGAGGTTGGTTTTAAATATAGTATTTTAGCATCAGGATCGACAGGTAACTGCTTTTACTTGGAAACGCCCAAGAA
GCGGTTGTTGATTGATGCAGGACTGACTGGAAAGAAAATCACCAGTCTCCTTGCTGAGATTGACAGAAGACCTGAGGATT
TGGATGCTATCTTGATTACCCACGAGCATTCCGACCATATCAAGGGTGTTGGAATCATGGCTCGAAAATATAACCTAGAT
GTCTATGCCAATGAAAAGACTTGGCAGATGATTGATGAGCGTCATATGATTGGCAACCTAGACGTCACACAAAAGCATGT
CTTTGAAAGAGGTAAGACCATGACCTTTGGAGACATTGACATTGAGAGCTTTGGTGTTAGTCATGACGCTGTAGACCCAC
AGTTTTACCGCATTATGAAGGATAACAAGTCCTTTGTCATGCTGACGGATACAGGATATGTGAGCGACCGTTTGGCTGGG
ATCATTGAAAATGCTGACGGCTACTTGATTGAGTCAAATCACGATGTGGAGATATTGCGAGCCGGCTCTTATCCTTGGAG
CCTCAAGCAGCGAATCTTATCTGACCTAGGGCATTTATCCAATGAAGATGGTGCCGGTGCCATGATTCGAAGCTTGGGCA
ATAAAACCAAGAAAATCTATCTCGGTCACCTAAGTCAGGAGAACAATATCAAAGAATTAGCCCACATGACAATGGTCAAT
CAGCTAGCAATGGCAGATTTAGGTGTTGGAACAGATTTTACTGTTCATGACACCTCACCAGATACCGCCTGTCCCTTGAC
AGACATCTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.093

100

0.751

Multiple sequence alignment