Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   DQL35_RS10990 Genome accession   NZ_LS483325
Coordinates   48955..49053 (+) Length   32 a.a.
NCBI ID   WP_200831644.1    Uniprot ID   A0A380KSQ5
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC7022     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context


Location: 43955..54053
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL35_RS00260 (NCTC7022_00052) purE 44115..44603 (+) 489 WP_111677621.1 5-(carboxyamino)imidazole ribonucleotide mutase -
  DQL35_RS00265 (NCTC7022_00053) purK 44590..45681 (+) 1092 WP_111677622.1 5-(carboxyamino)imidazole ribonucleotide synthase -
  DQL35_RS00270 (NCTC7022_00054) - 45691..45915 (+) 225 WP_111677623.1 phosphoribosylaminoimidazole carboxylase -
  DQL35_RS00275 (NCTC7022_00056) purB 46369..47661 (+) 1293 WP_037582405.1 adenylosuccinate lyase -
  DQL35_RS00280 (NCTC7022_00057) comR 47958..48872 (+) 915 WP_111677624.1 helix-turn-helix domain-containing protein Regulator
  DQL35_RS10990 (NCTC7022_00058) comS 48955..49053 (+) 99 WP_200831644.1 quorum-sensing system DWW-type pheromone Regulator
  DQL35_RS00285 (NCTC7022_00059) ruvB 49087..50088 (+) 1002 WP_111677625.1 Holliday junction branch migration DNA helicase RuvB -
  DQL35_RS00290 (NCTC7022_00060) - 50381..50839 (+) 459 WP_111677626.1 low molecular weight protein-tyrosine-phosphatase -
  DQL35_RS00295 (NCTC7022_00061) - 50845..51246 (+) 402 WP_037582396.1 membrane protein -
  DQL35_RS00300 (NCTC7022_00062) - 51243..53024 (+) 1782 WP_037582394.1 acyltransferase family protein -

Sequence


Protein


Download         Length: 32 a.a.        Molecular weight: 3869.63 Da        Isoelectric Point: 8.5430

>NTDB_id=1136605 DQL35_RS10990 WP_200831644.1 48955..49053(+) (comS) [Streptococcus equi subsp. zooepidemicus strain NCTC7022]
MFKKYQYYLLLAALLLLHSAQLLSDIDWWRVG

Nucleotide


Download         Length: 99 bp        

>NTDB_id=1136605 DQL35_RS10990 WP_200831644.1 48955..49053(+) (comS) [Streptococcus equi subsp. zooepidemicus strain NCTC7022]
ATGTTTAAAAAATATCAATACTATCTGCTTTTAGCTGCTTTACTTCTACTTCATTCTGCCCAATTACTTAGTGATATTGA
CTGGTGGCGTGTTGGTTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A380KSQ5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

56.667

93.75

0.531

  comS Streptococcus pyogenes MGAS315

40.625

100

0.406


Multiple sequence alignment