Detailed information NTG1136591

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: DQL35_RS09155
• Genome accession: NZ_LS483325
• Coordinates: 1888794..1889717 (-)
• Length: 307 a.a.
• NCBI ID: WP_012516278.1
• Uniprot ID: A0AAW3GKE0
• Organism: Streptococcus equi subsp. zooepidemicus strain NCTC7022
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1883794..1894717

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL35_RS09155 (NCTC7022_01850)	amiF	1888794..1889717 (-)	924	WP_012516278.1	ATP-binding cassette domain-containing protein	Regulator
DQL35_RS09160 (NCTC7022_01851)	amiE	1889710..1890780 (-)	1071	WP_012516279.1	ABC transporter ATP-binding protein	Regulator
DQL35_RS09165 (NCTC7022_01852)	amiD	1890789..1891715 (-)	927	WP_043030145.1	oligopeptide ABC transporter permease OppC	Regulator
DQL35_RS09170 (NCTC7022_01853)	amiC	1891715..1893214 (-)	1500	WP_111678545.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34670.89 Da
• Isoelectric Point: 6.9308

>NTDB_id=1136591 DQL35_RS09155 WP_012516278.1 1888794..1889717(-) (amiF) [Streptococcus equi subsp. zooepidemicus strain NCTC7022]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNETSSGEIRYDGKIINGKKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEDERKEKIKQMMSEVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMDPEFVIADEPISALDVSVRAQVLNLLKKIQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFV
NPVHPYTKSLLSAVPIPDPILERQKKLVVYHPEQHDYSVDKPSMVEIKPNHFVWANQAEAERYRKEL

Nucleotide

• Length: 924 bp

>NTDB_id=1136591 DQL35_RS09155 WP_012516278.1 1888794..1889717(-) (amiF) [Streptococcus equi subsp. zooepidemicus strain NCTC7022]
ATGTCTGAAAAATTAGTTGAAGTAAAAGACCTGGAGATTTCCTTTGGAGAGGGAAAGAAAAAGTTTGTTGCCGTTAAAAA
TGCCAATTTCTTTATCAATAAAGGAGAAACCTTTTCTCTTGTTGGAGAATCAGGCAGTGGAAAGACAACAATCGGTCGTG
CCATCATTGGTTTAAATGAAACAAGCTCAGGCGAAATCCGCTATGACGGTAAGATTATTAATGGTAAAAAATCAAAATCT
GAAGCTAATGAACTGATTAGAAAAATCCAAATGATTTTTCAGGATCCAGCAGCCAGCCTGAATGAGCGTGCAACGGTTGA
TTATATCATCTCAGAAGGCCTTTATAATTTTAACCTATTCAAAACAGAAGACGAACGTAAGGAAAAAATTAAACAGATGA
TGTCAGAGGTGGGCTTGCTTGCAGAGCACCTGACACGCTATCCTCATGAGTTTTCAGGCGGGCAGCGTCAGCGTATAGGT
ATTGCAAGAGCGCTTGTAATGGATCCGGAGTTTGTTATTGCTGATGAGCCGATTTCAGCTCTTGATGTATCTGTTCGTGC
TCAGGTCTTGAACCTGTTGAAGAAAATACAGGCTGAAAAAGGCTTGACCTATTTATTCATTGCTCATGATTTATCAGTTG
TGCGTTTTATTTCAGATCGTATTGCTGTTATTCACAAAGGAGTAATTGTTGAAGTCGCCGAAACAGAAGAGCTTTTTGTT
AATCCTGTTCACCCTTATACCAAATCTCTGCTGTCAGCGGTACCAATTCCAGATCCCATTTTAGAGCGTCAAAAGAAATT
GGTGGTTTATCATCCAGAGCAGCATGATTATTCTGTTGACAAGCCATCAATGGTGGAAATCAAACCAAATCACTTCGTCT
GGGCTAACCAGGCAGAAGCGGAGCGTTACCGCAAAGAGCTTTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	83.007	99.674	0.827
amiF	Streptococcus thermophilus LMD-9	82.68	99.674	0.824
amiF	Streptococcus salivarius strain HSISS4	82.68	99.674	0.824