Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   DQM44_RS01230 Genome accession   NZ_LS483318
Coordinates   220121..221380 (+) Length   419 a.a.
NCBI ID   WP_003057894.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 215121..226380
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM44_RS01205 (NCTC5370_00247) - 216977..217267 (-) 291 WP_012766514.1 hypothetical protein -
  DQM44_RS01210 (NCTC5370_00248) - 217423..217773 (+) 351 WP_003057937.1 thioredoxin domain-containing protein -
  DQM44_RS01215 (NCTC5370_00249) yajC 217880..218239 (+) 360 WP_003061950.1 preprotein translocase subunit YajC -
  DQM44_RS01220 (NCTC5370_00250) - 218467..219216 (+) 750 WP_046165991.1 isoprenyl transferase -
  DQM44_RS01225 (NCTC5370_00251) - 219229..220023 (+) 795 WP_003057886.1 phosphatidate cytidylyltransferase -
  DQM44_RS01230 (NCTC5370_00252) eeP 220121..221380 (+) 1260 WP_003057894.1 RIP metalloprotease RseP Regulator
  DQM44_RS01235 (NCTC5370_00253) - 221571..223427 (+) 1857 WP_012766518.1 proline--tRNA ligase -
  DQM44_RS01240 (NCTC5370_00254) - 223480..224037 (+) 558 WP_012766519.1 nucleotidyltransferase family protein -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45636.22 Da        Isoelectric Point: 8.2837

>NTDB_id=1136185 DQM44_RS01230 WP_003057894.1 220121..221380(+) (eeP) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370]
MLGIITFIIIFGILVIVHEFGHFYFAKKSGILVREFAIGMGPKIFSHVDQEGTLYTLRILPLGGYVRMAGWGDDKTEIKT
GTPASLTLNEQGLVKRINLSQSKIDPTSLPMNVTSYDLEDDLSITGLVLDETKTYAVDHNATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILLVFLQGGMPDFSSNQVRVQENGAAAKAGIRDNDRIVTINGHKVKDWADLTE
AVQASTRNLGASETIKVTYKSGQTLKTVAVKPQKQGNQYALGVKARLKTGFVDKLLGGLELAWNGAFAILNTLKGLITAF
SLNKLGGPVAMYQMSNQAAQNGLDSVLSLMAMLSINLGIFNLIPIPALDGGKILMNIIEAIRRKPLKQETETYITLVGVA
IMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=1136185 DQM44_RS01230 WP_003057894.1 220121..221380(+) (eeP) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370]
ATGTTAGGAATAATAACCTTTATTATTATTTTTGGGATTTTAGTCATTGTCCATGAATTTGGGCATTTCTATTTTGCCAA
AAAATCTGGGATTCTTGTCAGAGAATTTGCCATTGGTATGGGCCCCAAAATCTTTTCGCATGTTGACCAAGAAGGAACTC
TCTACACCTTGAGAATTTTGCCTTTGGGTGGTTACGTGCGTATGGCTGGTTGGGGAGATGACAAGACAGAAATCAAGACT
GGGACACCAGCTAGCTTGACGCTAAATGAGCAAGGGTTGGTCAAGCGCATCAACTTGTCTCAAAGTAAGATTGATCCCAC
TAGCCTGCCCATGAATGTCACCTCCTATGATTTGGAAGATGACCTTAGTATCACCGGTTTGGTTTTGGATGAGACCAAGA
CTTATGCTGTTGACCATAATGCAACCATTGTTGAAGAAGACGGTACTGAGATTCGAATCGCTCCGCTTGATGTGCAGTAC
CAAAATGCTAGCATTGGTGGCCGCTTAATCACCAACTTTGCTGGCCCTATGAATAACTTTATTCTAGGGATTGTGGTTTT
TATCCTCCTTGTTTTTTTACAAGGTGGTATGCCAGATTTTAGTAGCAATCAGGTCCGCGTGCAAGAAAACGGTGCCGCTG
CTAAAGCTGGTATCCGCGACAATGACCGGATTGTCACTATCAATGGTCATAAGGTCAAGGATTGGGCAGATTTGACCGAA
GCGGTCCAAGCGTCTACTCGCAATCTAGGTGCTTCCGAAACGATTAAGGTGACTTACAAATCAGGTCAAACCCTAAAAAC
CGTCGCTGTTAAGCCTCAAAAACAGGGCAATCAATATGCTCTAGGTGTGAAGGCAAGGTTGAAAACAGGTTTTGTTGATA
AGCTTCTAGGCGGTTTAGAATTGGCTTGGAATGGTGCTTTTGCTATTTTGAACACCTTGAAAGGTCTGATCACTGCCTTT
AGTTTAAATAAGCTAGGTGGTCCAGTTGCCATGTACCAAATGTCTAATCAGGCTGCCCAAAATGGCTTAGATTCTGTCTT
ATCTCTCATGGCAATGCTCTCTATCAACTTAGGAATTTTCAACTTAATTCCAATCCCTGCCCTTGACGGTGGGAAAATCT
TGATGAATATTATTGAAGCCATTCGTCGTAAACCTTTGAAACAAGAAACAGAAACCTATATCACTCTTGTTGGGGTTGCC
ATCATGGTTGTACTGATGATTGCCGTGACGTGGAATGATATTATGCGAGCTTTCTTCTAA

Domains


Predicted by InterproScan.

(206-271)

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

69.596

100

0.699

  eeP Streptococcus thermophilus LMD-9

69.359

100

0.697


Multiple sequence alignment