Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DQL75_RS14000 Genome accession   NZ_LS483317
Coordinates   2712642..2713307 (-) Length   221 a.a.
NCBI ID   WP_000697879.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NCTC5663     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2707642..2718307
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL75_RS13980 - 2708101..2708214 (-) 114 WP_072468803.1 hypothetical protein -
  DQL75_RS13985 (NCTC5663_02625) - 2708884..2710884 (-) 2001 WP_111762748.1 ABC transporter permease -
  DQL75_RS13990 (NCTC5663_02626) - 2710881..2711636 (-) 756 WP_000923768.1 ABC transporter ATP-binding protein -
  DQL75_RS13995 (NCTC5663_02627) braS 2711744..2712631 (-) 888 WP_000143420.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  DQL75_RS14000 (NCTC5663_02628) braR 2712642..2713307 (-) 666 WP_000697879.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  DQL75_RS14005 (NCTC5663_02629) - 2713333..2713533 (-) 201 WP_000604725.1 hypothetical protein -
  DQL75_RS14010 (NCTC5663_02630) - 2713731..2715155 (+) 1425 WP_111762749.1 alkaline phosphatase -
  DQL75_RS14760 (NCTC5663_02631) - 2715214..2715315 (-) 102 WP_000731976.1 SE2200 family small protein -
  DQL75_RS14020 (NCTC5663_02632) - 2715437..2715892 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  DQL75_RS14025 (NCTC5663_02633) - 2716137..2716898 (-) 762 WP_000323448.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25388.46 Da        Isoelectric Point: 4.7961

>NTDB_id=1136175 DQL75_RS14000 WP_000697879.1 2712642..2713307(-) (braR) [Staphylococcus aureus strain NCTC5663]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQSIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=1136175 DQL75_RS14000 WP_000697879.1 2712642..2713307(-) (braR) [Staphylococcus aureus strain NCTC5663]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAGCATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.548

100

0.995

Multiple sequence alignment