Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   DQL75_RS05310 Genome accession   NZ_LS483317
Coordinates   1025459..1026445 (+) Length   328 a.a.
NCBI ID   WP_111762128.1    Uniprot ID   A0A380DZQ3
Organism   Staphylococcus aureus strain NCTC5663     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context


Location: 1020459..1031445
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL75_RS05285 (NCTC5663_01003) opp4B 1020671..1021633 (+) 963 WP_000593417.1 oligopeptide ABC transporter permease -
  DQL75_RS05290 (NCTC5663_01004) opp4C 1021645..1022526 (+) 882 WP_001180264.1 oligopeptide ABC transporter permease -
  DQL75_RS05295 (NCTC5663_01005) trpS 1022568..1023557 (-) 990 WP_111762126.1 tryptophan--tRNA ligase -
  DQL75_RS05300 (NCTC5663_01006) spxA 1023852..1024247 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  DQL75_RS05305 (NCTC5663_01007) mecA 1024618..1025337 (+) 720 WP_111762127.1 adaptor protein MecA -
  DQL75_RS05310 (NCTC5663_01008) coiA 1025459..1026445 (+) 987 WP_111762128.1 competence protein CoiA Machinery gene
  DQL75_RS05315 (NCTC5663_01009) pepF 1026493..1028301 (+) 1809 WP_111762129.1 oligoendopeptidase F -
  DQL75_RS05320 (NCTC5663_01012) yjbH 1028761..1029567 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  DQL75_RS05325 (NCTC5663_01013) - 1029590..1029955 (-) 366 WP_000214067.1 truncated hemoglobin YjbI -
  DQL75_RS05330 (NCTC5663_01014) - 1030059..1030652 (-) 594 WP_000224622.1 CYTH domain-containing protein -
  DQL75_RS05335 (NCTC5663_01015) - 1030838..1031185 (+) 348 WP_001242107.1 hypothetical protein -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 38703.19 Da        Isoelectric Point: 9.5827

>NTDB_id=1136145 DQL75_RS05310 WP_111762128.1 1025459..1026445(+) (coiA) [Staphylococcus aureus strain NCTC5663]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKKIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKGNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLH
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSNLESDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=1136145 DQL75_RS05310 WP_111762128.1 1025459..1026445(+) (coiA) [Staphylococcus aureus strain NCTC5663]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAAAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAGATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAGGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTGCAT
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAATTTAGAAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A380DZQ3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.037

100

0.96

  coiA Staphylococcus aureus MW2

96.037

100

0.96


Multiple sequence alignment