Detailed information NTG1136053

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: DQL11_RS01460
• Genome accession: NZ_LS483315
• Coordinates: 267859..268782 (+)
• Length: 307 a.a.
• NCBI ID: WP_002986000.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC12059
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 262859..273782

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL11_RS01445 (NCTC12059_00289)	amiC	264359..265861 (+)	1503	WP_009880667.1	ABC transporter permease	Regulator
DQL11_RS01450 (NCTC12059_00290)	amiD	265861..266787 (+)	927	WP_002986004.1	oligopeptide ABC transporter permease OppC	Regulator
DQL11_RS01455 (NCTC12059_00291)	amiE	266796..267866 (+)	1071	WP_111704522.1	ABC transporter ATP-binding protein	Regulator
DQL11_RS01460 (NCTC12059_00292)	amiF	267859..268782 (+)	924	WP_002986000.1	ABC transporter ATP-binding protein	Regulator
DQL11_RS09480	-	268820..268909 (-)	90	WP_110002794.1	IS3 family transposase	-
DQL11_RS09255	-	268930..269109 (-)	180	WP_197708786.1	transposase	-

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34715.90 Da
• Isoelectric Point: 6.5113

>NTDB_id=1136053 DQL11_RS01460 WP_002986000.1 267859..268782(+) (amiF) [Streptococcus pyogenes strain NCTC12059]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERQKELVVYHPDQHDYTLDKPSMVEIKPNHFVWANQAEIEKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=1136053 DQL11_RS01460 WP_002986000.1 267859..268782(+) (amiF) [Streptococcus pyogenes strain NCTC12059]
ATGTCTGAGAAATTAGTCGAAGTAAAAGACCTAGAAATTTCCTTCGGAGAAGGAAAGAAAAAATTTGTTGCAGTTAAAAA
TGCTAATTTCTTTATTAAAAAAGGAGAAACCTTTTCTTTAGTTGGAGAATCTGGGAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAACGATACTAGTTCAGGTCAAATTTTATACGATGGGAAAGTAATTAATGGCAGAAAATCAAAATCA
GAAGCCAATGAGCTCATTCGTAAAATTCAAATGATTTTCCAAGATCCCGCTGCTAGTTTGAATGAACGGGCAACCGTTGA
CTACATCATTTCAGAAGGTCTTTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGAACATGA
TGGCCGAAGTTGGTTTGCTATCAGAGCATTTGACGCGCTACCCTCATGAATTTTCAGGAGGTCAACGTCAGCGGATCGGT
ATCGCTAGAGCCCTAGTAATGAACCCTGAATTCGTTATTGCTGATGAGCCGATTTCAGCTTTGGACGTTTCCGTTCGCGC
ACAGGTTTTAAACCTTCTCAAACGGATGCAAGCCGAAAAAGGTTTGACTTATCTCTTCATTGCCCATGATCTTTCAGTCG
TTCGCTTTATTTCAGATCGTATTGCGGTTATCCATAAAGGGGTTATTGTAGAAGTTGCAGAAACAGAAGAACTGTTTAAT
AACCCAATTCATCCCTACACCCAATCTTTGTTATCAGCCGTGCCTATCCCAGATCCAATTTTAGAGCGTCAAAAAGAACT
TGTTGTCTATCATCCAGACCAACATGATTATACATTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTT
GGGCAAACCAAGCAGAAATTGAAAAATATCAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.353	99.674	0.821
amiF	Streptococcus thermophilus LMD-9	82.026	99.674	0.818
amiF	Streptococcus salivarius strain HSISS4	82.026	99.674	0.818