Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | DQL89_RS06895 | Genome accession | NZ_LS483313 |
| Coordinates | 1460743..1461726 (+) | Length | 327 a.a. |
| NCBI ID | WP_103364377.1 | Uniprot ID | - |
| Organism | Staphylococcus simulans strain NCTC11046 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1455743..1466726
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL89_RS06865 (NCTC11046_01414) | - | 1456552..1457094 (+) | 543 | WP_103364380.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| DQL89_RS06870 (NCTC11046_01415) | - | 1457107..1458564 (+) | 1458 | WP_103364379.1 | rhomboid family protein | - |
| DQL89_RS06875 (NCTC11046_01416) | - | 1458548..1458748 (+) | 201 | WP_002481044.1 | YqgQ family protein | - |
| DQL89_RS06880 (NCTC11046_01417) | - | 1458748..1459734 (+) | 987 | WP_002481043.1 | ROK family glucokinase | - |
| DQL89_RS06885 (NCTC11046_01418) | - | 1459734..1460063 (+) | 330 | WP_002481042.1 | MTH1187 family thiamine-binding protein | - |
| DQL89_RS06890 (NCTC11046_01419) | - | 1460063..1460686 (+) | 624 | WP_103364378.1 | MBL fold metallo-hydrolase | - |
| DQL89_RS06895 (NCTC11046_01420) | comGA | 1460743..1461726 (+) | 984 | WP_103364377.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQL89_RS06900 (NCTC11046_01421) | comGB | 1461698..1462771 (+) | 1074 | WP_103364376.1 | competence type IV pilus assembly protein ComGB | - |
| DQL89_RS06905 (NCTC11046_01422) | comGC | 1462789..1463118 (+) | 330 | WP_002481038.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQL89_RS06910 (NCTC11046_01423) | comGD | 1463121..1463546 (+) | 426 | WP_002481037.1 | competence type IV pilus minor pilin ComGD | - |
| DQL89_RS13470 (NCTC11046_01424) | - | 1463530..1463850 (+) | 321 | WP_103364375.1 | hypothetical protein | - |
| DQL89_RS13825 | - | 1463801..1464067 (+) | 267 | WP_369122616.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| DQL89_RS06925 | - | 1464424..1464963 (+) | 540 | WP_002481034.1 | shikimate kinase | - |
| DQL89_RS06930 (NCTC11046_01427) | gcvT | 1465142..1466236 (+) | 1095 | WP_023015155.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 327 a.a. Molecular weight: 37296.33 Da Isoelectric Point: 7.5046
>NTDB_id=1135981 DQL89_RS06895 WP_103364377.1 1460743..1461726(+) (comGA) [Staphylococcus simulans strain NCTC11046]
MKRLFEKILIDAIAQRVSDIHFIPIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFMKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICE
EVFKRYT
MKRLFEKILIDAIAQRVSDIHFIPIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFMKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICE
EVFKRYT
Nucleotide
Download Length: 984 bp
>NTDB_id=1135981 DQL89_RS06895 WP_103364377.1 1460743..1461726(+) (comGA) [Staphylococcus simulans strain NCTC11046]
ATGAAAAGGCTATTTGAAAAAATTTTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACCAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATTACAACGTATCAGAAGTTAC
TTACTTTTATGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGCTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACTTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAG
GCTAGTTACAAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAA
ACAATCATATGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAA
GAAGTGTTTAAAAGATATACTTAA
ATGAAAAGGCTATTTGAAAAAATTTTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACCAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATTACAACGTATCAGAAGTTAC
TTACTTTTATGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGCTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACTTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAG
GCTAGTTACAAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAA
ACAATCATATGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAA
GAAGTGTTTAAAAGATATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
60.429 |
99.694 |
0.602 |
| comGA | Staphylococcus aureus N315 |
60.429 |
99.694 |
0.602 |
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
37.888 |
98.471 |
0.373 |