Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DQL63_RS04440 | Genome accession | NZ_LS483312 |
| Coordinates | 951630..952031 (+) | Length | 133 a.a. |
| NCBI ID | WP_002461219.1 | Uniprot ID | A0A853V538 |
| Organism | Staphylococcus lugdunensis strain NCTC7990 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 946630..957031
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL63_RS04415 (NCTC7990_00892) | - | 947913..948314 (+) | 402 | WP_002461226.1 | F0F1 ATP synthase subunit epsilon | - |
| DQL63_RS04420 (NCTC7990_00893) | - | 948452..948685 (+) | 234 | WP_002461224.1 | DUF1146 family protein | - |
| DQL63_RS04425 (NCTC7990_00894) | murA | 948849..950114 (+) | 1266 | WP_002461223.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| DQL63_RS04430 (NCTC7990_00895) | fabZ | 950151..950591 (+) | 441 | WP_002461222.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| DQL63_RS04435 (NCTC7990_00896) | - | 950988..951440 (-) | 453 | WP_002461221.1 | YwpF-like family protein | - |
| DQL63_RS04440 (NCTC7990_00897) | ssb | 951630..952031 (+) | 402 | WP_002461219.1 | single-stranded DNA-binding protein | Machinery gene |
| DQL63_RS04445 (NCTC7990_00898) | - | 952510..953217 (+) | 708 | WP_037543577.1 | transglycosylase family protein | - |
| DQL63_RS04450 (NCTC7990_00900) | tenA | 953630..954307 (+) | 678 | WP_002461217.1 | thiaminase II | - |
| DQL63_RS04455 (NCTC7990_00901) | thiD | 954312..955133 (+) | 822 | WP_037543574.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| DQL63_RS04460 (NCTC7990_00902) | thiM | 955126..955914 (+) | 789 | WP_002478969.1 | hydroxyethylthiazole kinase | - |
| DQL63_RS04465 (NCTC7990_00903) | thiE | 955917..956555 (+) | 639 | WP_002461213.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 133 a.a. Molecular weight: 15388.56 Da Isoelectric Point: 6.7151
>NTDB_id=1135937 DQL63_RS04440 WP_002461219.1 951630..952031(+) (ssb) [Staphylococcus lugdunensis strain NCTC7990]
MLNKIVIVGRLTKDAQIYEKEEVKIATFCVATERNYKDDNNEQIVDYILCKAYGRTATNIEKYTSQGSLVGITGQMRSRK
YTKDQQTHFVTELYVETIKFMSSKGKTHEILEEHPTTNIQPFSVDEMKLLNIE
MLNKIVIVGRLTKDAQIYEKEEVKIATFCVATERNYKDDNNEQIVDYILCKAYGRTATNIEKYTSQGSLVGITGQMRSRK
YTKDQQTHFVTELYVETIKFMSSKGKTHEILEEHPTTNIQPFSVDEMKLLNIE
Nucleotide
Download Length: 402 bp
>NTDB_id=1135937 DQL63_RS04440 WP_002461219.1 951630..952031(+) (ssb) [Staphylococcus lugdunensis strain NCTC7990]
ATGTTAAATAAAATCGTAATCGTTGGACGATTAACTAAAGATGCCCAAATATACGAGAAAGAGGAGGTTAAAATTGCTAC
ATTTTGTGTGGCTACGGAAAGAAATTATAAAGATGATAACAACGAGCAAATCGTAGATTATATTCTATGTAAAGCATATG
GTAGGACTGCTACCAACATTGAAAAGTATACCAGTCAGGGATCATTGGTTGGTATTACAGGTCAAATGCGCTCAAGAAAG
TATACTAAAGACCAACAAACACATTTTGTTACAGAATTATACGTAGAAACTATTAAATTCATGTCCTCTAAAGGCAAAAC
ACACGAAATCCTCGAAGAACATCCAACTACTAATATTCAACCTTTTTCAGTTGATGAAATGAAACTCTTAAATATCGAAT
AA
ATGTTAAATAAAATCGTAATCGTTGGACGATTAACTAAAGATGCCCAAATATACGAGAAAGAGGAGGTTAAAATTGCTAC
ATTTTGTGTGGCTACGGAAAGAAATTATAAAGATGATAACAACGAGCAAATCGTAGATTATATTCTATGTAAAGCATATG
GTAGGACTGCTACCAACATTGAAAAGTATACCAGTCAGGGATCATTGGTTGGTATTACAGGTCAAATGCGCTCAAGAAAG
TATACTAAAGACCAACAAACACATTTTGTTACAGAATTATACGTAGAAACTATTAAATTCATGTCCTCTAAAGGCAAAAC
ACACGAAATCCTCGAAGAACATCCAACTACTAATATTCAACCTTTTTCAGTTGATGAAATGAAACTCTTAAATATCGAAT
AA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
69.697 |
99.248 |
0.692 |
| ssb | Staphylococcus aureus MW2 |
68.939 |
99.248 |
0.684 |