Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   DQL63_RS01645 Genome accession   NZ_LS483312
Coordinates   355191..356099 (+) Length   302 a.a.
NCBI ID   WP_002460615.1    Uniprot ID   -
Organism   Staphylococcus lugdunensis strain NCTC7990     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 350191..361099
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL63_RS01625 (NCTC7990_00322) wecB 351208..352347 (+) 1140 WP_002460620.1 non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase -
  DQL63_RS01630 (NCTC7990_00323) - 352533..353981 (-) 1449 WP_002460619.1 alkaline phosphatase -
  DQL63_RS12420 - 354200..354307 (+) 108 Protein_320 hypothetical protein -
  DQL63_RS01640 (NCTC7990_00325) braR 354520..355185 (+) 666 WP_002460617.1 response regulator transcription factor Regulator
  DQL63_RS01645 (NCTC7990_00326) braS 355191..356099 (+) 909 WP_002460615.1 sensor histidine kinase Regulator
  DQL63_RS01650 (NCTC7990_00327) - 356205..356954 (+) 750 WP_002478514.1 ABC transporter ATP-binding protein -
  DQL63_RS01655 (NCTC7990_00328) - 356947..358938 (+) 1992 WP_231912833.1 FtsX-like permease family protein -
  DQL63_RS01660 (NCTC7990_00329) - 358980..359429 (+) 450 WP_002460612.1 membrane protein -
  DQL63_RS01665 (NCTC7990_00330) - 359516..359995 (+) 480 WP_002460610.1 DUF4064 domain-containing protein -
  DQL63_RS01670 (NCTC7990_00331) - 360268..360831 (+) 564 WP_002460609.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 302 a.a.        Molecular weight: 35278.81 Da        Isoelectric Point: 6.9257

>NTDB_id=1135934 DQL63_RS01645 WP_002460615.1 355191..356099(+) (braS) [Staphylococcus lugdunensis strain NCTC7990]
MTTFFDTIKRELIITAMALVVFLVIFFVFNLPYYAYFLGSGIMLFIMVIYWFIALSEFKKQQRLTSQLKVLEQEVQQLRS
KQTQYQNDIESYFLTWVHQIKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNHETDMSFTKVTVNELV
KPLIMKYSIQFIDQHTRIHYDRSDEEVLTDVQWASIMIEQILNNALKYARGKDIWLTFDKDINVLSIKDNGVGISTADLP
KIFDKGYSGYNGRLNEQSTGIGLFIVKHISNHIHHQVEVDSTLGQGTTFKIYFPKVDKMNEL

Nucleotide


Download         Length: 909 bp        

>NTDB_id=1135934 DQL63_RS01645 WP_002460615.1 355191..356099(+) (braS) [Staphylococcus lugdunensis strain NCTC7990]
ATGACAACGTTCTTTGACACAATTAAGCGTGAACTGATCATCACCGCAATGGCATTAGTTGTTTTTTTAGTAATCTTTTT
TGTCTTTAATTTGCCCTACTATGCCTACTTTTTAGGAAGTGGCATTATGTTATTTATCATGGTTATTTATTGGTTTATCG
CATTGAGCGAGTTTAAAAAACAACAACGATTGACATCTCAACTTAAAGTGTTAGAACAAGAAGTTCAACAATTAAGAAGC
AAGCAAACGCAATACCAAAATGACATCGAAAGCTATTTTCTTACTTGGGTACATCAAATTAAAACACCGATCACTGCCTC
CAAACTATTACTCGAACGTAATGAAGACAATGTTGTTAACCGTGTCCGACAAGAAATAATTCAAATTGATAATTACACTA
GTTTAGCTTTAAGCTATTTAAAATTAATGAATCATGAAACTGACATGAGCTTTACTAAAGTAACTGTCAATGAATTGGTT
AAGCCATTAATAATGAAATATTCAATACAATTTATCGATCAACATACACGTATACATTATGATCGCTCAGATGAAGAAGT
ATTGACAGATGTGCAATGGGCTTCCATTATGATAGAGCAAATTTTGAATAATGCACTAAAATATGCTCGTGGTAAAGATA
TTTGGTTAACTTTTGATAAAGATATAAACGTACTTTCTATCAAAGATAATGGTGTGGGTATTAGTACTGCTGATTTACCG
AAAATTTTTGATAAAGGTTATTCTGGTTATAATGGTCGTTTAAATGAGCAATCAACTGGTATTGGATTGTTTATAGTAAA
ACACATATCGAATCATATTCATCATCAAGTAGAAGTAGATTCTACGCTAGGTCAAGGTACGACATTTAAGATTTATTTTC
CTAAGGTAGATAAAATGAATGAACTTTAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(196-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

58.562

96.689

0.566

Multiple sequence alignment