Detailed information NTG0113592

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ER3413_RS20325
• Genome accession: NZ_CP009789
• Coordinates: 4095085..4096110 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli K-12 strain K-12 ER3413
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4090085..4101110

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ER3413_RS20295 (ER3413_4049)	zapB	4090169..4090414 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ER3413_RS20300 (ER3413_4050)	rraA	4090499..4090984 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ER3413_RS20305 (ER3413_4051)	menA	4091077..4092003 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ER3413_RS20310 (ER3413_4052)	hslU	4092070..4093401 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ER3413_RS20315 (ER3413_4053)	hslV	4093411..4093941 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ER3413_RS20320 (ER3413_4054)	ftsN	4094034..4094993 (-)	960	WP_000068828.1	cell division protein FtsN	-
ER3413_RS20325 (ER3413_4055)	cytR	4095085..4096110 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ER3413_RS20330 (ER3413_4056)	priA	4096266..4098464 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ER3413_RS20335 (ER3413_4057)	rpmE	4098667..4098879 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ER3413_RS20340 (ER3413_4058)	yiiX	4098940..4099548 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ER3413_RS20345 (ER3413_4059)	metJ	4099732..4100049 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=113592 ER3413_RS20325 WP_000644904.1 4095085..4096110(-) (cytR) [Escherichia coli K-12 strain K-12 ER3413]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=113592 ER3413_RS20325 WP_000644904.1 4095085..4096110(-) (cytR) [Escherichia coli K-12 strain K-12 ER3413]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628