Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DQL96_RS11955 | Genome accession | NZ_LS483309 |
| Coordinates | 2268643..2269038 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain NCTC9944 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2263643..2274038
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL96_RS11930 (NCTC9944_02237) | thiE | 2264243..2264884 (-) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
| DQL96_RS11935 (NCTC9944_02238) | thiM | 2264886..2265677 (-) | 792 | WP_001108479.1 | hydroxyethylthiazole kinase | - |
| DQL96_RS11940 (NCTC9944_02239) | thiD | 2265661..2266491 (-) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| DQL96_RS11945 (NCTC9944_02240) | tenA | 2266484..2267173 (-) | 690 | WP_000396077.1 | thiaminase II | - |
| DQL96_RS11950 (NCTC9944_02242) | sceD | 2267559..2268254 (-) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| DQL96_RS11955 (NCTC9944_02243) | ssb | 2268643..2269038 (-) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| DQL96_RS11960 (NCTC9944_02244) | - | 2269232..2269672 (+) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| DQL96_RS11965 (NCTC9944_02245) | fabZ | 2269731..2270171 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| DQL96_RS11970 (NCTC9944_02246) | murA | 2270205..2271470 (-) | 1266 | WP_000358000.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| DQL96_RS11975 (NCTC9944_02247) | - | 2271581..2271814 (-) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| DQL96_RS11980 | - | 2271946..2272038 (-) | 93 | WP_001790611.1 | hypothetical protein | - |
| DQL96_RS11985 (NCTC9944_02248) | - | 2272376..2272780 (-) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1135883 DQL96_RS11955 WP_000932694.1 2268643..2269038(-) (ssb) [Staphylococcus aureus strain NCTC9944]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1135883 DQL96_RS11955 WP_000932694.1 2268643..2269038(-) (ssb) [Staphylococcus aureus strain NCTC9944]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |