Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DQL85_RS10945 | Genome accession | NZ_LS483308 |
| Coordinates | 2116376..2116771 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain NCTC13137 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2111376..2121771
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL85_RS10915 (NCTC13137_02036) | thiE | 2111837..2112478 (-) | 642 | WP_000483155.1 | thiamine phosphate synthase | - |
| DQL85_RS10920 (NCTC13137_02037) | thiM | 2112471..2113271 (-) | 801 | WP_006190773.1 | hydroxyethylthiazole kinase | - |
| DQL85_RS10925 (NCTC13137_02038) | thiD | 2113255..2114085 (-) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| DQL85_RS10930 (NCTC13137_02039) | tenA | 2114078..2114767 (-) | 690 | WP_000396077.1 | thiaminase II | - |
| DQL85_RS10940 (NCTC13137_02042) | sceD | 2115292..2115987 (-) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| DQL85_RS10945 (NCTC13137_02043) | ssb | 2116376..2116771 (-) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| DQL85_RS10950 (NCTC13137_02044) | - | 2116965..2117405 (+) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| DQL85_RS10955 (NCTC13137_02045) | fabZ | 2117464..2117904 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| DQL85_RS10960 (NCTC13137_02046) | murA | 2117938..2119203 (-) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| DQL85_RS10965 (NCTC13137_02047) | - | 2119314..2119547 (-) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| DQL85_RS10970 | - | 2119679..2119771 (-) | 93 | WP_031835036.1 | hypothetical protein | - |
| DQL85_RS10975 (NCTC13137_02048) | - | 2120108..2120512 (-) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1135842 DQL85_RS10945 WP_000932694.1 2116376..2116771(-) (ssb) [Staphylococcus aureus strain NCTC13137]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1135842 DQL85_RS10945 WP_000932694.1 2116376..2116771(-) (ssb) [Staphylococcus aureus strain NCTC13137]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |