Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   DQL78_RS07135 Genome accession   NZ_LS483306
Coordinates   1398067..1399335 (-) Length   422 a.a.
NCBI ID   WP_016252404.1    Uniprot ID   S1RPE2
Organism   Enterococcus cecorum strain NCTC12421     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1393067..1404335
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL78_RS07130 (NCTC12421_01452) - 1396455..1398050 (-) 1596 WP_016252403.1 His/Gly/Thr/Pro-type tRNA ligase C-terminal domain-containing protein -
  DQL78_RS07135 (NCTC12421_01453) eeP 1398067..1399335 (-) 1269 WP_016252404.1 RIP metalloprotease RseP Regulator
  DQL78_RS07140 (NCTC12421_01454) - 1399496..1399939 (-) 444 WP_016252405.1 DUF234 domain-containing protein -
  DQL78_RS07145 (NCTC12421_01455) - 1400055..1400861 (-) 807 WP_016252406.1 phosphatidate cytidylyltransferase -
  DQL78_RS07150 (NCTC12421_01456) - 1400862..1401659 (-) 798 WP_016252407.1 isoprenyl transferase -
  DQL78_RS07155 (NCTC12421_01457) - 1401799..1403232 (-) 1434 WP_231940202.1 LTA synthase family protein -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46505.33 Da        Isoelectric Point: 5.4940

>NTDB_id=1135729 DQL78_RS07135 WP_016252404.1 1398067..1399335(-) (eeP) [Enterococcus cecorum strain NCTC12421]
MKSILVFLIIFSVIVIVHEFGHFYFARKSGILVREFSIGMGPKVFAKQGKDGVAYTIRLLPLGGYVRMAGADEGGDLTPG
MFISLVVDENNVVHKMNCCEKVELENSIPFEVADSDLEDELYVEGYVNGDDSDLVRFAVDHDATVIESDGTEIRIAPRDV
QFQSAKLWQRMLTNFAGPLNNFILTFVLCVILVFIQGGMSDPNTSKLGEIMPDSPASQAGLKQGDEIKTIANKKISNWND
LVDEIQKNPGKSLKVKYIRDGQTKTTTLTPKTVTVNDEKVGQIGITMYKKTGVMTMITGGFEVSINMATQIFQALKSIIV
QPDINKLGGPVAIFQQSAQVANEGLITIIAYMALISVNIGIFNLLPIPALDGGKLVLNILEAIRRKPLKPEHEGIITMIG
VGMILLLFVLVTWNDIQRMFFR

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=1135729 DQL78_RS07135 WP_016252404.1 1398067..1399335(-) (eeP) [Enterococcus cecorum strain NCTC12421]
ATGAAATCGATTCTAGTATTTTTGATTATCTTTTCAGTTATCGTCATTGTTCATGAGTTTGGACATTTTTATTTTGCACG
TAAATCTGGTATTTTAGTGCGTGAATTTTCAATCGGGATGGGTCCGAAAGTCTTTGCCAAACAAGGAAAAGATGGGGTGG
CCTATACGATTCGCTTGCTTCCATTAGGCGGCTATGTGCGCATGGCTGGTGCAGACGAAGGTGGAGACTTAACACCAGGG
ATGTTTATTTCATTAGTAGTGGATGAAAACAATGTCGTGCACAAGATGAATTGCTGCGAAAAAGTGGAATTGGAAAATAG
TATTCCGTTTGAGGTTGCCGATAGTGATTTAGAAGATGAGCTCTATGTTGAAGGTTATGTCAATGGAGACGATAGCGATC
TTGTACGTTTTGCTGTCGATCATGATGCAACCGTGATTGAATCAGATGGTACGGAGATTCGCATCGCACCACGAGATGTA
CAGTTCCAGTCAGCTAAATTATGGCAACGCATGCTTACTAATTTTGCAGGTCCGTTAAACAATTTTATCTTAACTTTTGT
CTTATGTGTGATTTTGGTCTTTATTCAAGGTGGGATGAGTGATCCGAACACCTCCAAATTAGGCGAAATTATGCCTGATT
CCCCTGCGAGTCAAGCGGGATTGAAACAAGGGGATGAAATTAAAACAATTGCTAACAAGAAAATTAGTAACTGGAATGAT
TTGGTAGATGAAATTCAAAAAAATCCAGGAAAATCACTTAAAGTCAAATATATACGCGATGGTCAAACCAAAACCACGAC
CTTAACACCTAAAACAGTGACGGTCAATGATGAAAAAGTTGGCCAAATTGGGATTACCATGTATAAGAAAACTGGTGTGA
TGACAATGATTACAGGTGGTTTTGAAGTGTCGATAAATATGGCCACTCAGATTTTCCAAGCTTTGAAATCAATTATTGTC
CAGCCTGATATTAATAAGTTAGGTGGTCCAGTAGCAATTTTCCAACAATCTGCGCAGGTAGCCAATGAAGGTCTCATTAC
GATTATTGCGTATATGGCGTTGATTTCAGTGAATATTGGGATTTTTAATTTACTTCCAATTCCAGCCTTAGATGGTGGGA
AGCTCGTATTAAATATTTTAGAAGCGATTCGTCGCAAACCCTTAAAGCCAGAACACGAAGGTATTATTACCATGATTGGT
GTAGGGATGATTTTATTGCTCTTTGTTTTAGTCACTTGGAATGATATTCAAAGGATGTTTTTTAGATAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(209-268)

Peptidase family M50 (Peptidase_M50)

(7-407)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB S1RPE2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

48.372

100

0.493
  eeP Streptococcus thermophilus LMG 18311

48.131

100

0.488

Multiple sequence alignment