Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   DQL80_RS09700 Genome accession   NZ_LS483302
Coordinates   1922882..1923925 (-) Length   347 a.a.
NCBI ID   WP_111680449.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NCTC8726     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1917882..1928925
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL80_RS09670 (NCTC8726_01831) - 1918302..1919558 (-) 1257 WP_001793983.1 aminopeptidase -
  DQL80_RS09675 (NCTC8726_01832) - 1919561..1919761 (-) 201 WP_000180460.1 DUF1128 family protein -
  DQL80_RS09680 (NCTC8726_01833) - 1919908..1920372 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  DQL80_RS09685 (NCTC8726_01834) - 1920379..1920654 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  DQL80_RS09690 (NCTC8726_01835) - 1920933..1922150 (+) 1218 WP_111680448.1 YihY/virulence factor BrkB family protein -
  DQL80_RS09695 (NCTC8726_01836) vraR 1922263..1922892 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  DQL80_RS09700 (NCTC8726_01837) vraS 1922882..1923925 (-) 1044 WP_111680449.1 sensor histidine kinase Regulator
  DQL80_RS09705 (NCTC8726_01838) liaF 1923922..1924623 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  DQL80_RS09710 (NCTC8726_01839) - 1924638..1925024 (-) 387 WP_111680450.1 hypothetical protein -
  DQL80_RS09715 (NCTC8726_01840) map 1925241..1925999 (-) 759 WP_111680451.1 type I methionyl aminopeptidase -
  DQL80_RS09725 (NCTC8726_01841) - 1926474..1927460 (+) 987 WP_000999713.1 FUSC family protein -
  DQL80_RS09730 (NCTC8726_01842) - 1927636..1928052 (-) 417 WP_111680727.1 hypothetical protein -
  DQL80_RS09735 - 1928081..1928190 (-) 110 Protein_1808 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40060.52 Da        Isoelectric Point: 6.0577

>NTDB_id=1135614 DQL80_RS09700 WP_111680449.1 1922882..1923925(-) (vraS) [Staphylococcus aureus strain NCTC8726]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERSLEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1135614 DQL80_RS09700 WP_111680449.1 1922882..1923925(-) (vraS) [Staphylococcus aureus strain NCTC8726]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTACCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTCGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGATCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997


Multiple sequence alignment