Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | JM183_RS06205 | Genome accession | NZ_LR962863 |
| Coordinates | 1315900..1316874 (+) | Length | 324 a.a. |
| NCBI ID | WP_126496312.1 | Uniprot ID | - |
| Organism | Staphylococcus schleiferi strain NCTC12218 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1310900..1321874
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JM183_RS06170 (NCTC12218_01311) | rpmG | 1311178..1311327 (+) | 150 | WP_016425180.1 | 50S ribosomal protein L33 | - |
| JM183_RS06175 (NCTC12218_01312) | - | 1311708..1312247 (+) | 540 | WP_016425179.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| JM183_RS06180 (NCTC12218_01313) | - | 1312265..1313668 (+) | 1404 | WP_126496314.1 | rhomboid family protein | - |
| JM183_RS06185 (NCTC12218_01314) | - | 1313706..1313912 (+) | 207 | WP_016425177.1 | YqgQ family protein | - |
| JM183_RS06190 (NCTC12218_01315) | - | 1313905..1314891 (+) | 987 | WP_016425176.1 | ROK family glucokinase | - |
| JM183_RS06195 (NCTC12218_01316) | - | 1314892..1315203 (+) | 312 | WP_016425175.1 | MTH1187 family thiamine-binding protein | - |
| JM183_RS06200 (NCTC12218_01317) | - | 1315219..1315842 (+) | 624 | WP_016425174.1 | MBL fold metallo-hydrolase | - |
| JM183_RS06205 (NCTC12218_01318) | comGA | 1315900..1316874 (+) | 975 | WP_126496312.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| JM183_RS06210 (NCTC12218_01319) | comGB | 1316843..1317910 (+) | 1068 | WP_126496310.1 | competence type IV pilus assembly protein ComGB | - |
| JM183_RS06215 (NCTC12218_01320) | comGC | 1317922..1318245 (+) | 324 | WP_016425170.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| JM183_RS06220 (NCTC12218_01321) | comGD | 1318220..1318666 (+) | 447 | WP_016425169.1 | competence type IV pilus minor pilin ComGD | - |
| JM183_RS06225 (NCTC12218_01322) | - | 1319012..1319344 (+) | 333 | WP_236744674.1 | hypothetical protein | - |
| JM183_RS06230 | - | 1319508..1320035 (+) | 528 | WP_016425167.1 | shikimate kinase | - |
| JM183_RS06235 (NCTC12218_01324) | gcvT | 1320195..1321286 (+) | 1092 | WP_016425166.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36936.67 Da Isoelectric Point: 7.3931
>NTDB_id=1134910 JM183_RS06205 WP_126496312.1 1315900..1316874(+) (comGA) [Staphylococcus schleiferi strain NCTC12218]
MQLLFDHVIQYAIQSEASDIHFIPSQSQVEVKLRVKDQLIMYDTLNKETYQKLLTLLKFQAGLDITTRHKAQSGRYIYEY
KNLYYLRVSTLPLNLGTESCVIRITPQYFQTSNLDSVIDIKTTMEKKQGLILFSGPTGAGKSTLMYQMVVYAKQKLNLNI
ITIEDPVEQLVNGITQISVNEKADITYSSSLKAILRCDPDVILIGEIRDKYIARDVIQASLSGHLVLSTIHANDCSGVLL
RLIEMGLSQQDLSQSINMIINQRLITTKNDNRQLVYETMNQSEIQFFLKNNFKLPAAFESLVDKLHSLNQEGVIDEKILR
KYST
MQLLFDHVIQYAIQSEASDIHFIPSQSQVEVKLRVKDQLIMYDTLNKETYQKLLTLLKFQAGLDITTRHKAQSGRYIYEY
KNLYYLRVSTLPLNLGTESCVIRITPQYFQTSNLDSVIDIKTTMEKKQGLILFSGPTGAGKSTLMYQMVVYAKQKLNLNI
ITIEDPVEQLVNGITQISVNEKADITYSSSLKAILRCDPDVILIGEIRDKYIARDVIQASLSGHLVLSTIHANDCSGVLL
RLIEMGLSQQDLSQSINMIINQRLITTKNDNRQLVYETMNQSEIQFFLKNNFKLPAAFESLVDKLHSLNQEGVIDEKILR
KYST
Nucleotide
Download Length: 975 bp
>NTDB_id=1134910 JM183_RS06205 WP_126496312.1 1315900..1316874(+) (comGA) [Staphylococcus schleiferi strain NCTC12218]
ATGCAATTATTATTTGACCATGTCATCCAATATGCGATTCAAAGTGAAGCAAGTGATATTCATTTTATACCTTCACAATC
ACAAGTTGAGGTGAAATTAAGAGTTAAAGATCAGTTAATCATGTATGACACGTTGAATAAAGAAACCTATCAAAAATTAC
TCACGCTTTTAAAGTTTCAAGCTGGACTTGATATTACAACACGCCACAAAGCACAAAGCGGTAGATATATTTATGAGTAT
AAAAATTTATATTATCTACGCGTATCTACTTTGCCACTTAATTTAGGTACTGAAAGTTGTGTCATACGCATAACACCCCA
ATATTTCCAAACTTCAAATTTAGACTCAGTAATAGATATTAAAACAACAATGGAAAAAAAGCAGGGCCTCATATTATTTA
GTGGTCCAACGGGTGCAGGTAAAAGTACGTTGATGTATCAAATGGTCGTTTATGCAAAGCAAAAATTAAATCTTAATATT
ATTACAATTGAGGATCCCGTCGAACAGCTTGTAAACGGTATTACACAAATTTCAGTAAATGAAAAAGCCGATATCACATA
TAGTTCTTCCTTGAAAGCCATTTTAAGATGTGATCCAGATGTTATTCTAATTGGTGAAATAAGAGATAAATATATTGCCA
GAGACGTCATTCAAGCGAGTTTAAGTGGCCATTTAGTATTATCCACAATTCATGCGAATGACTGCTCTGGTGTATTATTA
AGGCTGATAGAAATGGGACTGTCACAGCAAGACTTGTCACAATCTATTAATATGATTATTAATCAACGTTTAATTACAAC
TAAAAACGATAACCGACAACTTGTTTATGAAACAATGAATCAATCTGAAATTCAATTTTTCTTAAAAAATAATTTTAAAT
TACCTGCAGCATTTGAAAGCTTAGTAGATAAGTTGCATTCTTTAAACCAAGAAGGCGTGATCGATGAAAAAATATTACGA
AAATATTCAACATAG
ATGCAATTATTATTTGACCATGTCATCCAATATGCGATTCAAAGTGAAGCAAGTGATATTCATTTTATACCTTCACAATC
ACAAGTTGAGGTGAAATTAAGAGTTAAAGATCAGTTAATCATGTATGACACGTTGAATAAAGAAACCTATCAAAAATTAC
TCACGCTTTTAAAGTTTCAAGCTGGACTTGATATTACAACACGCCACAAAGCACAAAGCGGTAGATATATTTATGAGTAT
AAAAATTTATATTATCTACGCGTATCTACTTTGCCACTTAATTTAGGTACTGAAAGTTGTGTCATACGCATAACACCCCA
ATATTTCCAAACTTCAAATTTAGACTCAGTAATAGATATTAAAACAACAATGGAAAAAAAGCAGGGCCTCATATTATTTA
GTGGTCCAACGGGTGCAGGTAAAAGTACGTTGATGTATCAAATGGTCGTTTATGCAAAGCAAAAATTAAATCTTAATATT
ATTACAATTGAGGATCCCGTCGAACAGCTTGTAAACGGTATTACACAAATTTCAGTAAATGAAAAAGCCGATATCACATA
TAGTTCTTCCTTGAAAGCCATTTTAAGATGTGATCCAGATGTTATTCTAATTGGTGAAATAAGAGATAAATATATTGCCA
GAGACGTCATTCAAGCGAGTTTAAGTGGCCATTTAGTATTATCCACAATTCATGCGAATGACTGCTCTGGTGTATTATTA
AGGCTGATAGAAATGGGACTGTCACAGCAAGACTTGTCACAATCTATTAATATGATTATTAATCAACGTTTAATTACAAC
TAAAAACGATAACCGACAACTTGTTTATGAAACAATGAATCAATCTGAAATTCAATTTTTCTTAAAAAATAATTTTAAAT
TACCTGCAGCATTTGAAAGCTTAGTAGATAAGTTGCATTCTTTAAACCAAGAAGGCGTGATCGATGAAAAAATATTACGA
AAATATTCAACATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
57.895 |
99.691 |
0.577 |
| comGA | Staphylococcus aureus N315 |
57.895 |
99.691 |
0.577 |