Detailed information NTG1134887

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACLWA7_RS17170
• Genome accession: NZ_LR962646
• Coordinates: 3965211..3966605 (+)
• Length: 464 a.a.
• NCBI ID: WP_047127086.1
• Uniprot ID: A0A7U7HJH5
• Organism: Xanthomonas arboricola isolate Xanthomonas sp. CPBF 1483
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3960211..3971605

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLWA7_RS17155 (X12_003408)	sucD	3961106..3961981 (-)	876	WP_011038208.1	succinate--CoA ligase subunit alpha	-
ACLWA7_RS17160 (X12_003409)	sucC	3962006..3963175 (-)	1170	WP_016901264.1	ADP-forming succinate--CoA ligase subunit beta	-
ACLWA7_RS17165 (X12_003410)	-	3963407..3965020 (+)	1614	WP_039512337.1	sensor histidine kinase	-
ACLWA7_RS17170 (X12_003411)	pilR	3965211..3966605 (+)	1395	WP_047127086.1	sigma-54-dependent transcriptional regulator	Regulator
ACLWA7_RS17175 (X12_003412)	pilB	3967060..3968796 (-)	1737	WP_053051303.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ACLWA7_RS17180 (X12_003413)	-	3968831..3970357 (-)	1527	WP_053051304.1	hypothetical protein	-
ACLWA7_RS17185 (X12_003414)	-	3970327..3970896 (-)	570	WP_231103946.1	hypothetical protein	-

Sequence

Protein

• Length: 464 a.a.
• Molecular weight: 50190.57 Da
• Isoelectric Point: 6.5112

>NTDB_id=1134887 ACLWA7_RS17170 WP_047127086.1 3965211..3966605(+) (pilR) [Xanthomonas arboricola isolate Xanthomonas sp. CPBF 1483]
MNEPKSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLANNPYDLCLTDMRLPDGNGIELVTEIAKHYPQTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDISVLRGLVKHALELNNRDRPAPPPPPPEQASRLLGDSSAMESLRATIGKVAR
SQAPVYIVGESGVGKELVARTIHEQGARAAGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADKPGLFQAAHGGTLFLD
EVAELPLQMQVKLLRAIQEKSVRPVGASSESLVDVRILSATHKNLGDLVSDGRFRHDLYYRINVIELRVPPLRERGGDLP
QLAAAIIARLAHSHGRPIPLLTQSALDALDQYGFPGNVRELENILERALALAEDDQISASDLRLPAHGGHRLAATPGSAA
VEPREAVVDIDPASAALPSYIEQLERAAIQKALEENRWNKTKTAAQLGITFRALRYKLKKLGME

Nucleotide

• Length: 1395 bp

>NTDB_id=1134887 ACLWA7_RS17170 WP_047127086.1 3965211..3966605(+) (pilR) [Xanthomonas arboricola isolate Xanthomonas sp. CPBF 1483]
ATGAACGAACCGAAAAGTGCCCTGGTTGTCGATGACGAGCGTGACATTCGCGAACTGCTTGTTCTCACCCTGGGCCGGAT
GGGCCTGCGCATCAGCACCGCCGCCAACCTGGCCGAAGCGCGCGAGCTGCTGGCCAACAATCCCTACGATCTGTGCCTGA
CCGACATGCGGTTGCCTGACGGCAACGGCATTGAACTGGTTACCGAAATCGCCAAGCACTATCCGCAGACCCCGGTGGCG
ATGATCACCGCGTTCGGCAGCATGGACCTGGCGGTGGAAGCTTTGAAGGCCGGTGCCTTCGACTTCGTCAGCAAGCCGGT
GGACATCAGCGTGCTGCGTGGCCTGGTCAAGCACGCGCTGGAATTGAACAACCGCGACCGCCCCGCCCCGCCACCGCCGC
CACCGGAACAGGCCAGCCGCCTGCTGGGCGATTCCAGTGCGATGGAAAGCCTGCGCGCCACCATCGGCAAGGTCGCGCGC
AGCCAGGCGCCGGTCTACATCGTCGGCGAATCGGGCGTAGGCAAGGAGCTGGTCGCGCGCACCATCCACGAACAGGGCGC
ACGCGCGGCCGGCCCGTTCGTGCCGGTCAACTGCGGCGCCATTCCCGCCGAGCTGATGGAAAGCGAGTTCTTCGGCCATA
AGAAGGGCAGCTTCACCGGCGCGCATGCCGACAAACCCGGCCTGTTCCAGGCCGCGCATGGCGGCACGCTGTTTCTGGAC
GAGGTGGCCGAATTGCCGCTGCAGATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAATCGGTGCGCCCGGTGGGCGC
CTCCAGCGAGTCGCTGGTGGACGTGCGCATTCTCTCGGCCACCCACAAAAACCTGGGCGACCTGGTCTCCGACGGCCGTT
TCCGCCACGACCTGTACTACCGCATCAACGTCATCGAACTGCGCGTGCCGCCGCTGCGCGAACGCGGCGGCGACCTGCCG
CAACTGGCCGCGGCCATCATCGCGCGCCTGGCACATAGCCACGGCCGGCCGATTCCGCTGCTGACCCAGTCCGCGCTCGA
CGCGCTGGACCAGTATGGCTTCCCGGGCAATGTGCGCGAGCTGGAAAACATCCTCGAACGCGCCCTGGCCCTGGCCGAAG
ACGACCAGATCAGCGCCAGCGACCTGCGCCTGCCCGCCCACGGCGGCCATCGCCTGGCCGCCACCCCCGGCAGCGCCGCC
GTCGAACCCCGCGAAGCGGTGGTCGACATCGACCCCGCCTCGGCCGCCCTGCCTTCCTACATCGAGCAACTGGAGCGCGC
CGCGATCCAGAAGGCGCTGGAGGAGAATCGCTGGAACAAAACCAAGACCGCCGCGCAGCTGGGCATCACGTTTCGGGCGT
TGCGTTACAAGTTGAAGAAGTTGGGGATGGAGTAG

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (421-461)

• Response regulator receiver domain (Response_reg) (8-115)

• Sigma-54 interaction domain (Sigma54_activat) (142-307)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.067	99.784	0.629
pilR	Acinetobacter baumannii strain A118	49.138	100	0.491