Detailed information NTG0113448

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: FORC6_RS01845
• Genome accession: NZ_CP009765
• Coordinates: 384789..387611 (-)
• Length: 940 a.a.
• NCBI ID: WP_025508045.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain FORC_006
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 379789..392611

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC6_RS01835 (FORC6_0305)	-	381704..382825 (+)	1122	WP_015297341.1	pyridoxal-phosphate-dependent aminotransferase family protein	-
FORC6_RS01840 (FORC6_0306)	-	382943..384721 (-)	1779	WP_060657252.1	PglL family O-oligosaccharyltransferase	-
FORC6_RS01845 (FORC6_0307)	uvrA	384789..387611 (-)	2823	WP_025508045.1	excinuclease ABC subunit UvrA	Machinery gene
FORC6_RS01850 (FORC6_0308)	galU	387749..388621 (-)	873	WP_005466627.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
FORC6_RS01855 (FORC6_0309)	qstR	388879..389523 (-)	645	WP_005480993.1	LuxR C-terminal-related transcriptional regulator	Regulator
FORC6_RS01860 (FORC6_0310)	ssb	389802..390332 (+)	531	WP_005466625.1	single-stranded DNA-binding protein	Machinery gene
FORC6_RS01865 (FORC6_0311)	csrD	390573..392582 (+)	2010	WP_025612578.1	RNase E specificity factor CsrD	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103913.19 Da
• Isoelectric Point: 6.5101

>NTDB_id=113448 FORC6_RS01845 WP_025508045.1 384789..387611(-) (uvrA) [Vibrio parahaemolyticus strain FORC_006]
MDKIEVRGARTHNLKDINLTIPRDKLTVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPTHHAPLAAQTVSQMVDKVLELPEGSKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLSDPPTLELHKKHTIEVVVDRFKVRPDLQQRLAESFETTLELSGGIAVIAPMDGD
GEEIIFSANFACPQCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPSRVIQDDSLSLAQGAIRGWDQKNYYYFQML
TSLADHYGFDLHAPFNSLPKKTQDVILKGSGRTEIEFKYINDRGDIRVKRHPFEGILNTLERRYRDTESNSVREELAKYI
STKSCSSCGGTRLRLEARNVFIADTTLPEIVELSIADALTFFQTLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGNVVAEGTMDEIIANPNSLTGQYLSGAKEIVVPKERTPRDPKKTVELLGATGNNLKNVDLSIPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAHPSPYKSIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYKGKTIDEVLEMTVEDARTFFD
PVPAIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVSQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=113448 FORC6_RS01845 WP_025508045.1 384789..387611(-) (uvrA) [Vibrio parahaemolyticus strain FORC_006]
ATGGATAAAATAGAAGTTCGCGGTGCCCGAACCCATAACCTCAAAGACATCAATCTGACTATTCCTCGCGATAAACTGAC
AGTAATTACTGGGTTAAGCGGCTCCGGTAAGTCCTCTCTCGCATTCGATACCTTATATGCAGAAGGCCAACGACGTTATG
TCGAATCACTGTCTGCTTATGCTCGTCAGTTTTTGTCTCTTATGGAAAAACCAGATGTCGACCATATCGAAGGTTTATCA
CCGGCGATTTCTATTGAACAAAAATCGACATCTCATAACCCTCGCTCAACCGTCGGTACCATCACCGAAGTTTACGACTA
CTTACGTCTGCTTTACGCTCGTGTTGGTGAACCACGCTGTCCTACTCACCACGCCCCATTAGCCGCACAAACTGTCAGCC
AGATGGTGGATAAAGTATTGGAACTGCCAGAAGGCAGTAAAATGATGCTGCTTGCTCCAATCGTAAAAGAGCGCAAAGGT
GAGCATGTAAAAACACTAGAAAACCTTGCCGCACAAGGTTTTATTCGAGCGCGTATTGACGGCGAAACTTGCGATCTTTC
AGATCCACCAACACTTGAGCTACACAAAAAACACACCATTGAAGTCGTGGTCGACCGATTCAAAGTTCGCCCAGATCTGC
AACAACGTTTAGCAGAGTCATTTGAGACGACGCTAGAGCTTTCTGGTGGTATTGCGGTGATTGCTCCGATGGATGGCGAT
GGGGAAGAAATCATCTTTTCAGCGAACTTCGCTTGTCCGCAATGTGGCTACAGCATGCAAGAGCTGGAACCGAGATTGTT
CTCATTTAACAACCCAGCAGGCGCGTGTGGAACTTGTGATGGCTTGGGTGTACAACAGTATTTTGATCCAAGCCGAGTGA
TTCAAGATGACTCACTCAGTTTGGCACAAGGCGCCATTCGTGGTTGGGATCAAAAGAATTACTATTACTTCCAAATGCTG
ACTTCATTGGCGGATCATTATGGATTTGATTTGCATGCTCCGTTCAACTCTCTGCCAAAGAAAACGCAAGACGTTATTCT
CAAAGGCTCAGGCCGCACCGAGATCGAGTTTAAATACATCAATGATCGCGGCGACATTCGTGTAAAGCGCCACCCATTCG
AAGGGATTTTAAATACGCTTGAACGTCGTTACCGCGATACCGAGTCCAACTCAGTTCGAGAAGAGTTGGCTAAATACATC
TCGACAAAATCATGCTCAAGCTGTGGCGGTACTCGTCTACGCCTTGAAGCACGTAATGTATTTATTGCCGATACTACCTT
ACCTGAGATCGTTGAGCTCAGTATTGCAGATGCCCTTACCTTCTTCCAAACACTCAAGCTAGAAGGTCAACGTGCGCAAA
TCGCAGAAAAGGTCATGAAGGAGATCAATGATCGTCTACAGTTCCTTGTAAATGTGGGCTTGAACTACCTTAATTTATCC
CGGAGTGCAGAGACACTATCCGGTGGCGAAGCACAACGCATTCGCTTAGCGAGCCAAATTGGTGCAGGTCTTGTTGGTGT
CATGTACGTCTTAGATGAACCGTCAATTGGCCTCCACCAGCGTGATAACGAACGACTCCTAAAAACACTGACTCATTTGC
GCGATTTAGGTAATACCGTACTCGTGGTAGAACACGATGAAGATGCCATTCGCTGTGCCGATCACGTGATTGATATTGGC
CCGGGAGCGGGGGTACACGGCGGTAATGTGGTTGCCGAAGGAACGATGGATGAGATCATCGCCAACCCGAACTCTCTCAC
AGGTCAGTATCTAAGTGGCGCAAAAGAGATAGTAGTCCCTAAAGAGCGTACCCCTCGCGATCCCAAGAAAACCGTCGAGC
TACTAGGCGCAACAGGTAACAACCTGAAGAACGTCGACTTGTCTATTCCTGTCGGATTGTTTAGCTGTATTACTGGCGTG
TCTGGCTCCGGTAAATCAACCTTGATCAACGATACGTTCTTCAAAATTGCACACACCCAACTCAATGGCGCTACTACTGC
ACACCCATCGCCTTATAAGTCGATTAAAGGTCTAGAACATTTCGATAAGGTTATCGACATCGATCAAAGCCCAATTGGCC
GAACACCACGCTCGAACCCTGCGACGTACACGGGAATCTTTACCCCTATTCGCGAGCTGTTTGCTGGTACGCAGGAATCA
CGTTCACGTGGTTACAAACCTGGCCGCTTTAGTTTTAATGTTCGCGGTGGTCGCTGTGAAGCTTGTCAAGGGGATGGTGT
TATCAAAGTCGAGATGCACTTCTTACCAGACGTGTACGTGCCATGTGATGTGTGTAAAGGGAAGCGCTATAACCGCGAAA
CACTGGAAGTACGCTACAAAGGCAAAACCATCGATGAAGTACTGGAAATGACCGTCGAGGATGCTCGCACCTTCTTCGAT
CCTGTTCCTGCGATTGCCCGCAAGCTGCAAACTCTAATGGACGTTGGTCTGTCTTACATTCGTTTAGGTCAAGCGGCAAC
CACATTATCAGGCGGCGAAGCGCAGCGAGTGAAATTGGCAAGAGAGCTATCCAAGCGTGATACGGGTAAAACCTTGTACA
TTCTGGATGAGCCAACAACCGGTCTGCACTTCCATGATATTCAGCAGCTATTAACTGTACTTCATCGCCTGCGCGATCAC
GGGAATACCGTTGTGGTTATCGAGCATAACTTGGACGTCATCAAAACAGCAGACTGGATCATCGACTTAGGACCAGAAGG
CGGACAAGGCGGCGGAGAGATCATTGCCCAGGGAACACCAGAAGATGTGTCTCAGATCGAAGGTTCGCACACAGCTCGAT
TCCTTAAGCCTATGTTGAAATAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-859)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-398)

• UvrA interaction domain (UvrA_inter) (130-237)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.856	100	0.58
uvrA	Streptococcus pneumoniae TIGR4	57.856	100	0.58
uvrA	Streptococcus pneumoniae D39	57.856	100	0.58