Detailed information NTG0113449

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: N919_RS05705
• Genome accession: NZ_CP006686
• Coordinates: 1080905..1081864 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni NCTC 11168-Kf1
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1075905..1086864

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N919_RS05680 (N919_05705)	neuC	1076474..1077589 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
N919_RS09130	-	1077586..1078500 (+)	915	Protein_1089	beta-1,4-N-acetylgalactosaminyltransferase	-
N919_RS09135	-	1078534..1079196 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
N919_RS05695	-	1079191..1080038 (-)	848	Protein_1091	glycosyltransferase	-
N919_RS05700 (N919_05725)	waaV	1080022..1080846 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
N919_RS05705 (N919_05730)	waaF	1080905..1081864 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
N919_RS05710 (N919_05735)	gmhA	1081845..1082405 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
N919_RS05715 (N919_05740)	rfaE1	1082402..1083787 (-)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
N919_RS05720 (N919_05745)	rfaD	1083780..1084733 (-)	954	WP_002858041.1	ADP-glyceromanno-heptose 6-epimerase	-
N919_RS05725 (N919_05750)	gmhB	1084734..1085294 (-)	561	WP_002853963.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
N919_RS05730 (N919_05755)	-	1085376..1085678 (+)	303	WP_002852762.1	cytochrome c	-
N919_RS05735 (N919_05760)	ccoS	1085701..1085907 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=113449 N919_RS05705 WP_002875425.1 1080905..1081864(+) (waaF) [Campylobacter jejuni subsp. jejuni NCTC 11168-Kf1]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=113449 N919_RS05705 WP_002875425.1 1080905..1081864(+) (waaF) [Campylobacter jejuni subsp. jejuni NCTC 11168-Kf1]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1