Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   NI25_RS17000 Genome accession   NZ_CP009754
Coordinates   3884368..3885492 (+) Length   374 a.a.
NCBI ID   WP_030404779.1    Uniprot ID   A0A6B3QRH4
Organism   Streptomyces sp. CCM_MD2014     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3879368..3890492
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NI25_RS16985 (NI25_16895) - 3879531..3880343 (+) 813 WP_061443260.1 hypothetical protein -
  NI25_RS16990 (NI25_16900) - 3880492..3882276 (-) 1785 WP_061443261.1 BACON domain-containing protein -
  NI25_RS16995 (NI25_16905) radA/sms 3882877..3884286 (+) 1410 WP_061443262.1 DNA repair protein RadA Machinery gene
  NI25_RS17000 (NI25_16910) disA 3884368..3885492 (+) 1125 WP_030404779.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  NI25_RS39705 (NI25_16915) - 3885513..3886355 (-) 843 WP_078884643.1 hypothetical protein -
  NI25_RS17010 (NI25_16920) - 3886513..3887439 (+) 927 WP_061443263.1 A/G-specific adenine glycosylase -
  NI25_RS17015 (NI25_16925) - 3887717..3888250 (+) 534 WP_003975479.1 SigE family RNA polymerase sigma factor -
  NI25_RS17020 (NI25_16930) - 3888238..3888936 (+) 699 WP_199560937.1 hypothetical protein -
  NI25_RS17025 (NI25_16935) cseB 3889071..3889772 (+) 702 WP_061443265.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40084.82 Da        Isoelectric Point: 5.0058

>NTDB_id=113389 NI25_RS17000 WP_030404779.1 3884368..3885492(+) (disA) [Streptomyces sp. CCM_MD2014]
MAANDRAAAPGKSGGSAGADGLMRASLSAVAPGTSLRDGLERVLRGNTGGLIVLGSDKTVEQMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLLPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALAELDKLSHAELLELSTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=113389 NI25_RS17000 WP_030404779.1 3884368..3885492(+) (disA) [Streptomyces sp. CCM_MD2014]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCGCCCGGCACGTCCCTGCGCGACGGCCTGGAGCGGGTCCTGCGCGGCAACACGGGCGGTCTGATCGTGC
TGGGCTCCGACAAGACCGTCGAGCAGATGTGCACGGGCGGTTTCGTGCTGGACGTCGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTCTCGTCCGACCTGTCGAAGATCCTGCGGGCCGGGGTGCAGCTGCTTCC
CGATCCGACCATCCCCACGGAGGAGACCGGCACGCGGCACCGCACGGCGGACCGGGTCAGCAAGCAGGTCGGGTTCCCCG
TCGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGCAGCGGCGGGTGCTGGAGGATTCGGCGGCG
ATCCTGTCGCGGGCCAATCAGGCGCTGGCGACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTCTCCGCGGTCGCGCAGCGGCTGGAGATGGTGCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGGACGGACGGGCGGCTGCTCGCGCTGCAGTTGGACGAGCTGATCGCC
GGGGTGGAGCCGGAGCGCGAGCTGGTGGTGCGGGACTACGTGCCCGAGCCGACCGCCAAGCGGTCCCGCACGGTCGACGA
GGCGCTCGCCGAGCTGGACAAGCTCAGCCATGCGGAACTGCTGGAACTGTCCACGGTGGCCCGGGCGTTGGGTTACACCG
GGTCGCCGGAGACGCTGGACTCGGCGGTGTCGCCGCGCGGCTTCCGGCTGCTGGCCAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCCAGTGTCGACGACCTGCAGACCGTGGA
CGGCGTCGGCGAGGCGCGGGCGCGCAGCGTGCGCGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6B3QRH4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.26

96.524

0.447