Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SA268_RS10850 | Genome accession | NZ_CP006630 |
| Coordinates | 2147806..2148201 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus subsp. aureus SA268 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2142806..2153201
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SA268_RS10820 (SA268_2003) | thiE | 2143404..2144045 (-) | 642 | WP_000483147.1 | thiamine phosphate synthase | - |
| SA268_RS10825 (SA268_2004) | thiM | 2144047..2144838 (-) | 792 | WP_001108486.1 | hydroxyethylthiazole kinase | - |
| SA268_RS10830 (SA268_2005) | thiD | 2144822..2145652 (-) | 831 | WP_000594943.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| SA268_RS10835 (SA268_2006) | tenA | 2145645..2146334 (-) | 690 | WP_000396067.1 | thiaminase II | - |
| SA268_RS10845 (SA268_2007) | sceD | 2146722..2147417 (-) | 696 | WP_000751997.1 | lytic transglycosylase SceD | - |
| SA268_RS10850 (SA268_2008) | ssb | 2147806..2148201 (-) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| SA268_RS10855 (SA268_2009) | istB | 2148344..2149105 (-) | 762 | WP_001066124.1 | IS21-like element helper ATPase IstB | - |
| SA268_RS10860 (SA268_2010) | istA | 2149098..2150390 (-) | 1293 | WP_000777467.1 | IS21 family transposase | - |
| SA268_RS10865 (SA268_2011) | - | 2150601..2151041 (+) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| SA268_RS10870 (SA268_2012) | fabZ | 2151098..2151538 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| SA268_RS10875 (SA268_2013) | murA | 2151572..2152837 (-) | 1266 | WP_000358002.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| SA268_RS10880 (SA268_2014) | - | 2152948..2153181 (-) | 234 | WP_000384520.1 | DUF1146 family protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=113247 SA268_RS10850 WP_000932694.1 2147806..2148201(-) (ssb) [Staphylococcus aureus subsp. aureus SA268]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=113247 SA268_RS10850 WP_000932694.1 2147806..2148201(-) (ssb) [Staphylococcus aureus subsp. aureus SA268]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |