Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BKMNNEJI_RS14415 | Genome accession | NZ_LR822061 |
| Coordinates | 2860508..2860903 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus isolate HU-14 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2855508..2865903
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BKMNNEJI_RS14385 (LJDFIFNA_02760) | - | 2856766..2857170 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| BKMNNEJI_RS14390 (LJDFIFNA_RS14390) | - | 2857508..2857600 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| BKMNNEJI_RS14395 (LJDFIFNA_02761) | - | 2857732..2857965 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| BKMNNEJI_RS14400 (LJDFIFNA_02762) | murA | 2858076..2859341 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| BKMNNEJI_RS14405 (LJDFIFNA_02763) | fabZ | 2859375..2859815 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| BKMNNEJI_RS14410 (LJDFIFNA_02764) | - | 2859874..2860314 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| BKMNNEJI_RS14415 (LJDFIFNA_02765) | ssb | 2860508..2860903 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| BKMNNEJI_RS14420 (LJDFIFNA_02766) | sceD | 2861292..2861987 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| BKMNNEJI_RS14425 (LJDFIFNA_02767) | tenA | 2862374..2863063 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| BKMNNEJI_RS14430 (LJDFIFNA_02768) | thiD | 2863056..2863886 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| BKMNNEJI_RS14435 (LJDFIFNA_02769) | thiM | 2863870..2864661 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| BKMNNEJI_RS14440 (LJDFIFNA_02770) | thiE | 2864663..2865304 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1132299 BKMNNEJI_RS14415 WP_000932694.1 2860508..2860903(+) (ssb) [Staphylococcus aureus isolate HU-14]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1132299 BKMNNEJI_RS14415 WP_000932694.1 2860508..2860903(+) (ssb) [Staphylococcus aureus isolate HU-14]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |