Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | LJDFIFNA_RS14435 | Genome accession | NZ_LR822060 |
| Coordinates | 2859173..2859568 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus isolate P3.1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2854173..2864568
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJDFIFNA_RS14405 (BKMNNEJI_02759) | - | 2855431..2855835 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| LJDFIFNA_RS14410 (H0509_RS14410) | - | 2856173..2856265 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| LJDFIFNA_RS14415 (BKMNNEJI_02760) | - | 2856397..2856630 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| LJDFIFNA_RS14420 (BKMNNEJI_02761) | murA | 2856741..2858006 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| LJDFIFNA_RS14425 (BKMNNEJI_02762) | fabZ | 2858040..2858480 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| LJDFIFNA_RS14430 (BKMNNEJI_02763) | - | 2858539..2858979 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| LJDFIFNA_RS14435 (BKMNNEJI_02764) | ssb | 2859173..2859568 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| LJDFIFNA_RS14440 (BKMNNEJI_02765) | sceD | 2859957..2860652 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| LJDFIFNA_RS14445 (BKMNNEJI_02766) | tenA | 2861039..2861728 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| LJDFIFNA_RS14450 (BKMNNEJI_02767) | thiD | 2861721..2862551 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| LJDFIFNA_RS14455 (BKMNNEJI_02768) | thiM | 2862535..2863326 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| LJDFIFNA_RS14460 (BKMNNEJI_02769) | thiE | 2863328..2863969 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1132254 LJDFIFNA_RS14435 WP_000932694.1 2859173..2859568(+) (ssb) [Staphylococcus aureus isolate P3.1]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1132254 LJDFIFNA_RS14435 WP_000932694.1 2859173..2859568(+) (ssb) [Staphylococcus aureus isolate P3.1]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |