Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK/comK1   Type   Regulator
Locus tag   SA268_RS04825 Genome accession   NZ_CP006630
Coordinates   999713..1000282 (-) Length   189 a.a.
NCBI ID   WP_000287265.1    Uniprot ID   A0A7U7EXU5
Organism   Staphylococcus aureus subsp. aureus SA268     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 994713..1005282
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA268_RS04805 (SA268_0910) - 996216..997574 (+) 1359 WP_000021872.1 TrkH family potassium uptake protein -
  SA268_RS04810 (SA268_0911) - 997713..999224 (+) 1512 WP_000414178.1 bifunctional metallophosphatase/5'-nucleotidase -
  SA268_RS04825 (SA268_0912) comK/comK1 999713..1000282 (-) 570 WP_000287265.1 competence protein ComK Regulator
  SA268_RS04830 (SA268_0913) - 1000492..1000710 (+) 219 WP_000876826.1 IDEAL domain-containing protein -
  SA268_RS04835 (SA268_0914) - 1000791..1001777 (-) 987 WP_000668820.1 lipoate--protein ligase -
  SA268_RS04840 (SA268_0915) - 1001976..1002152 (+) 177 WP_000214898.1 YkvS family protein -
  SA268_RS04845 (SA268_0916) - 1002167..1002769 (+) 603 WP_001033867.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  SA268_RS04850 (SA268_0917) - 1003165..1004811 (+) 1647 WP_014363402.1 IS1182-like element ISSau3 family transposase -
  SA268_RS15555 - 1005111..1005173 (+) 63 WP_228764722.1 hypothetical protein -

Sequence


Protein


Download         Length: 189 a.a.        Molecular weight: 22601.83 Da        Isoelectric Point: 9.6091

>NTDB_id=113220 SA268_RS04825 WP_000287265.1 999713..1000282(-) (comK/comK1) [Staphylococcus aureus subsp. aureus SA268]
MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPIL
LTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=113220 SA268_RS04825 WP_000287265.1 999713..1000282(-) (comK/comK1) [Staphylococcus aureus subsp. aureus SA268]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGAAA
TGGTAGCGAAATAATTCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGACAAACCGCATCACTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCATTATTTCCAACTTATTTTTTCCCAACACATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATTAAAGAATTAAAAAATCGTAAATGTAAAGTGACATTTATTAATAATGAATCAATCATTCTTCATGTTT
CATACCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTATTATATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGACCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGA
AGATAAATAA

Domains


Predicted by InterproScan.

(5-156)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7U7EXU5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

100

100

1

  comK/comK1 Staphylococcus aureus N315

100

100

1


Multiple sequence alignment