Detailed information NTG1131950

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: H1W92_RS06765
• Genome accession: NZ_LR822039
• Coordinates: 1286526..1287452 (-)
• Length: 308 a.a.
• NCBI ID: WP_002946409.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus isolate STH_CIRM_1116
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1281526..1292452

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1W92_RS06735 (STHERMO_1470)	-	1281605..1282399 (-)	795	WP_059257398.1	HAD hydrolase family protein	-
H1W92_RS06740 (STHERMO_1471)	-	1282582..1282959 (+)	378	WP_011226300.1	GntR family transcriptional regulator	-
H1W92_RS06745 (STHERMO_1472)	-	1282964..1283662 (+)	699	WP_011226301.1	ABC transporter ATP-binding protein	-
H1W92_RS06750 (STHERMO_1473)	-	1283674..1284459 (+)	786	WP_002951425.1	hypothetical protein	-
H1W92_RS06755 (STHERMO_1474)	amiF	1284509..1285438 (-)	930	WP_002951426.1	ATP-binding cassette domain-containing protein	Regulator
H1W92_RS06760 (STHERMO_1475)	amiE	1285431..1286516 (-)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
H1W92_RS06765 (STHERMO_1476)	amiD	1286526..1287452 (-)	927	WP_002946409.1	oligopeptide ABC transporter permease OppC	Regulator
H1W92_RS06770 (STHERMO_1477)	amiC	1287452..1288945 (-)	1494	WP_011227407.1	ABC transporter permease	Regulator
H1W92_RS06775 (STHERMO_1478)	amiA	1289007..1290974 (-)	1968	WP_180475749.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34694.85 Da
• Isoelectric Point: 9.7054

>NTDB_id=1131950 H1W92_RS06765 WP_002946409.1 1286526..1287452(-) (amiD) [Streptococcus thermophilus isolate STH_CIRM_1116]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILITIILMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=1131950 H1W92_RS06765 WP_002946409.1 1286526..1287452(-) (amiD) [Streptococcus thermophilus isolate STH_CIRM_1116]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTACTATTA
TTTTAATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTCTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATCGGTATTGCCTATAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATCATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterProScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	100	100	1
amiD	Streptococcus thermophilus LMD-9	100	100	1
amiD	Streptococcus salivarius strain HSISS4	96.429	100	0.964