Detailed information NTG1131775

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: H1X38_RS06830
• Genome accession: NZ_LR822035
• Coordinates: 1321529..1322455 (-)
• Length: 308 a.a.
• NCBI ID: WP_002946409.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus isolate STH_CIRM_1051
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1316529..1327455

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1X38_RS06800 (STHERMO_1518)	-	1316606..1317400 (-)	795	WP_014727618.1	HAD-IIB family hydrolase	-
H1X38_RS06805 (STHERMO_1519)	-	1317585..1317962 (+)	378	WP_011226300.1	GntR family transcriptional regulator	-
H1X38_RS06810 (STHERMO_1520)	-	1317967..1318665 (+)	699	WP_014727619.1	ABC transporter ATP-binding protein	-
H1X38_RS06815 (STHERMO_1521)	-	1318677..1319462 (+)	786	WP_014727620.1	hypothetical protein	-
H1X38_RS06820 (STHERMO_1522)	amiF	1319512..1320441 (-)	930	WP_014727621.1	ATP-binding cassette domain-containing protein	Regulator
H1X38_RS06825 (STHERMO_1523)	amiE	1320434..1321519 (-)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
H1X38_RS06830 (STHERMO_1524)	amiD	1321529..1322455 (-)	927	WP_002946409.1	oligopeptide ABC transporter permease OppC	Regulator
H1X38_RS06835 (STHERMO_1525)	amiC	1322455..1323948 (-)	1494	WP_014608541.1	ABC transporter permease	Regulator
H1X38_RS06840 (STHERMO_1526)	amiA	1324010..1325977 (-)	1968	WP_014621802.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34694.85 Da
• Isoelectric Point: 9.7054

>NTDB_id=1131775 H1X38_RS06830 WP_002946409.1 1321529..1322455(-) (amiD) [Streptococcus thermophilus isolate STH_CIRM_1051]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILITIILMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=1131775 H1X38_RS06830 WP_002946409.1 1321529..1322455(-) (amiD) [Streptococcus thermophilus isolate STH_CIRM_1051]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTACTATTA
TTTTAATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTCTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATCGGTATTGCCTATAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATCATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	100	100	1
amiD	Streptococcus thermophilus LMD-9	100	100	1
amiD	Streptococcus salivarius strain HSISS4	96.429	100	0.964