Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   H1X08_RS08820 Genome accession   NZ_LR822025
Coordinates   1717175..1718437 (-) Length   420 a.a.
NCBI ID   WP_179972570.1    Uniprot ID   -
Organism   Streptococcus thermophilus isolate STH_CIRM_961     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1712175..1723437
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1X08_RS08810 (STHERMO_2021) - 1712665..1714605 (-) 1941 WP_100273345.1 ABC transporter substrate binding protein -
  H1X08_RS08815 (STHERMO_2022) - 1715242..1717104 (-) 1863 WP_179972571.1 proline--tRNA ligase -
  H1X08_RS08820 (STHERMO_2023) eeP 1717175..1718437 (-) 1263 WP_179972570.1 RIP metalloprotease RseP Regulator
  H1X08_RS08825 (STHERMO_2024) - 1718454..1719248 (-) 795 WP_179972569.1 phosphatidate cytidylyltransferase -
  H1X08_RS08830 (STHERMO_2025) - 1719261..1720010 (-) 750 WP_179972568.1 isoprenyl transferase -
  H1X08_RS08835 (STHERMO_2026) - 1720139..1720477 (-) 339 WP_100284950.1 preprotein translocase subunit YajC -
  H1X08_RS08840 (STHERMO_2027) - 1720603..1721319 (-) 717 WP_179972567.1 YebC/PmpR family DNA-binding transcriptional regulator -
  H1X08_RS08845 (STHERMO_2028) - 1721504..1722853 (-) 1350 WP_179972566.1 glucose-6-phosphate isomerase -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45649.16 Da        Isoelectric Point: 7.3563

>NTDB_id=1131231 H1X08_RS08820 WP_179972570.1 1717175..1718437(-) (eeP) [Streptococcus thermophilus isolate STH_CIRM_961]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKM
GSPASLTLGKDGKVRRINLSDRQVDQTALPMNVTAYDLEDKLTITGLVLGETKTYEVDHNATIVEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDTSTNLIQVANGGAAQVSGLKTGDAIVAINKDKVTDWDSLKE
ALRENTQKFSKGDSLSVTVKRSNGQEETISVKPQESQGSYFLGVSPVLKTGLKDKIFGGFQMAWEGATAILATLKGLITN
FSLNKLGGPVAMFQMSAQASESGLISILNLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGV
AVMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=1131231 H1X08_RS08820 WP_179972570.1 1717175..1718437(-) (eeP) [Streptococcus thermophilus isolate STH_CIRM_961]
ATGAAAGCTATTATTACTTTTTTACTGATTTTCTGTGTGATTGTCGTCTTCCATGAGTTTGGCCATTTCTTCTTTGCCAA
ACGATCAGGCATTCTAGTGCGTGAATTTGCCATTGGGATGGGTCCGAAAATTTTTGCCCACACTGGTAAGGATGGTACCG
TTTATACTATTCGTATCCTTCCTTTGGGTGGTTATGTGCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAATG
GGGAGTCCTGCTAGCCTAACGCTTGGAAAAGATGGCAAAGTGAGGCGTATCAATCTTTCAGATCGTCAGGTTGACCAGAC
GGCTTTGCCTATGAACGTTACTGCCTATGATTTGGAAGATAAGTTAACTATTACAGGTCTTGTCCTAGGTGAGACCAAGA
CCTATGAGGTTGATCATAATGCCACTATCGTTGAGGAAGACGGTACGGAGCTTCGTATTGCTCCTAAGGATGTCCAATAT
CAAAATGCTAGCATTTGGGGACGTTTAATTACCAATTTTGCTGGTCCTATGAACAACTTTATTCTTGGGGTCTTGGTCTT
TATTATCCTTGCCTTTGTTCAAGGTGGTGTTCAAGATACGTCGACCAACCTTATCCAGGTGGCTAATGGTGGTGCTGCCC
AGGTGTCAGGTTTGAAAACTGGTGATGCCATCGTGGCCATTAACAAGGACAAGGTTACTGACTGGGACAGCTTGAAAGAA
GCGTTGAGAGAGAATACCCAAAAATTCTCGAAAGGCGACAGCCTTTCTGTGACGGTTAAGAGAAGTAATGGTCAGGAAGA
AACTATTTCTGTTAAACCCCAAGAGAGCCAAGGGAGCTACTTTTTAGGTGTCTCTCCTGTCTTAAAGACAGGTCTTAAAG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGTGCGACGGCAATCCTCGCTACGCTCAAAGGGCTCATTACCAAC
TTTAGCTTGAACAAGCTTGGTGGACCGGTTGCTATGTTCCAGATGTCTGCACAAGCCTCAGAAAGTGGATTGATTTCCAT
TCTTAACCTTATGGGAATGCTCTCTATCAACTTAGGGATTTTCAATCTTATTCCAATTCCAGCCCTTGACGGTGGTAAAA
TTGTTATGAATATTATTGAAGCTATTCGTCGTAAACCACTTAATCAAGAAATTGAAAGCTATATCACACTCGCAGGTGTT
GCGGTCATGGTTGTCCTTATGATTGCAGTAACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains


Predicted by InterproScan.

(204-272)

(6-406)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

99.286

100

0.993

  eeP Streptococcus thermophilus LMG 18311

99.048

100

0.99


Multiple sequence alignment