Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   STHERMO_RS01195 Genome accession   NZ_LR822006
Coordinates   212174..213436 (+) Length   420 a.a.
NCBI ID   WP_011226831.1    Uniprot ID   -
Organism   Streptococcus thermophilus isolate STH_CIRM_16     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 207174..218436
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STHERMO_RS01170 (STHERMO_0230) - 207754..209103 (+) 1350 WP_179970423.1 glucose-6-phosphate isomerase -
  STHERMO_RS01175 (STHERMO_0231) - 209292..210008 (+) 717 WP_002949309.1 YebC/PmpR family DNA-binding transcriptional regulator -
  STHERMO_RS01180 (STHERMO_0232) - 210134..210472 (+) 339 WP_011225395.1 preprotein translocase subunit YajC -
  STHERMO_RS01185 (STHERMO_0233) - 210601..211350 (+) 750 WP_002949314.1 isoprenyl transferase -
  STHERMO_RS01190 (STHERMO_0234) - 211363..212157 (+) 795 WP_002949317.1 phosphatidate cytidylyltransferase -
  STHERMO_RS01195 (STHERMO_0235) eeP 212174..213436 (+) 1263 WP_011226831.1 RIP metalloprotease RseP Regulator
  STHERMO_RS01200 (STHERMO_0236) - 213507..215369 (+) 1863 WP_011225397.1 proline--tRNA ligase -
  STHERMO_RS01205 (STHERMO_0237) - 215986..217926 (+) 1941 WP_059257366.1 ABC transporter substrate binding protein -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45650.13 Da        Isoelectric Point: 7.3561

>NTDB_id=1130427 STHERMO_RS01195 WP_011226831.1 212174..213436(+) (eeP) [Streptococcus thermophilus isolate STH_CIRM_16]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKT
GSPASLTLGKDGKVRRINLSDRQVDQTALPMNVTAYDLEDKLTITGLVLGETKTYEVDHDATIVEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDTSTNLIQVTNGGAAQVSGLKTGDAIVAINKDKVTDWDSLKE
ALRENTQKFSKGDSLSVTVKRSNGQEETISVKPQESQGSYFLGVSPVLKTGLKDKIFGGFQMAWEGATAILATLKGLITN
FSLNKLGGPVAMFQMSAQASESGLISILDLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQKIESYITLAGV
AVMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=1130427 STHERMO_RS01195 WP_011226831.1 212174..213436(+) (eeP) [Streptococcus thermophilus isolate STH_CIRM_16]
ATGAAAGCTATTATTACTTTTTTACTGATTTTCTGTGTGATTGTCGTCTTCCATGAGTTTGGCCATTTCTTCTTTGCCAA
ACGATCAGGCATTCTGGTGCGTGAATTTGCCATTGGGATGGGTCCTAAAATTTTTGCACACACTGGTAAGGATGGTACCG
TTTATACTATTCGTATCCTTCCTTTGGGTGGTTATGTGCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAACG
GGGAGTCCTGCTAGCCTAACGCTTGGAAAAGATGGCAAAGTGAGACGTATCAATCTTTCAGATCGTCAGGTTGACCAGAC
GGCTTTGCCTATGAACGTTACTGCCTATGATTTGGAAGATAAGTTAACTATTACAGGTCTTGTCCTAGGTGAGACCAAGA
CCTATGAGGTTGACCATGATGCCACTATCGTTGAGGAAGACGGTACGGAGCTTCGTATTGCTCCTAAGGATGTCCAATAT
CAAAATGCTAGCATTTGGGGACGTTTAATTACCAATTTCGCTGGTCCTATGAACAACTTTATTCTTGGGGTCTTGGTCTT
TATTATCCTTGCCTTTGTTCAAGGTGGTGTTCAAGATACGTCGACCAACCTTATCCAGGTGACTAATGGTGGTGCTGCCC
AGGTGTCAGGTTTGAAAACTGGTGATGCCATCGTGGCCATTAACAAGGACAAGGTTACTGACTGGGACAGCTTGAAAGAA
GCATTGAGAGAGAATACCCAAAAATTCTCGAAAGGCGACAGCCTTTCTGTGACGGTTAAGAGAAGTAATGGTCAGGAAGA
AACTATTTCTGTTAAACCCCAAGAGAGCCAAGGGAGCTACTTTTTAGGTGTCTCTCCTGTCTTAAAGACAGGTCTTAAAG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGTGCGACGGCAATCCTCGCTACGCTCAAAGGGCTCATTACCAAC
TTTAGCTTGAACAAGCTTGGTGGACCGGTTGCTATGTTCCAGATGTCTGCACAAGCCTCAGAAAGTGGGTTGATTTCCAT
TCTTGACCTTATGGGAATGCTCTCTATCAACTTAGGGATTTTCAATCTTATTCCAATTCCAGCCCTTGACGGTGGTAAAA
TTGTTATGAATATTATTGAAGCTATTCGTCGTAAACCACTTAATCAAAAAATTGAAAGCTATATCACACTCGCAGGTGTT
GCGGTCATGGTTGTCCTTATGATTGCAGTAACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains


Predicted by InterproScan.

(6-406)

(204-272)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

99.524

100

0.995

  eeP Streptococcus thermophilus LMG 18311

99.286

100

0.993


Multiple sequence alignment