Detailed information NTG1130390

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: L1Z78_RS22520
• Genome accession: NZ_LR813084
• Coordinates: 4946943..4948151 (+)
• Length: 402 a.a.
• NCBI ID: WP_234638565.1
• Uniprot ID: -
• Organism: Delftia tsuruhatensis isolate BB1455
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4941943..4953151

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L1Z78_RS22500 (TML_04470)	coaD	4942713..4943213 (-)	501	WP_234638561.1	pantetheine-phosphate adenylyltransferase	-
L1Z78_RS22505 (TML_04471)	rsmD	4943345..4944052 (-)	708	WP_234638562.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
L1Z78_RS22510 (TML_04472)	-	4944049..4945410 (-)	1362	WP_234638563.1	M16 family metallopeptidase	-
L1Z78_RS22515 (TML_04473)	-	4945436..4946914 (-)	1479	WP_234638564.1	M16 family metallopeptidase	-
L1Z78_RS22520 (TML_04474)	pilA	4946943..4948151 (+)	1209	WP_234638565.1	signal recognition particle-docking protein FtsY	Machinery gene
L1Z78_RS22525 (TML_04475)	-	4948391..4949383 (+)	993	WP_234638566.1	Bug family tripartite tricarboxylate transporter substrate binding protein	-
L1Z78_RS22530 (TML_04476)	cutA	4949370..4949753 (-)	384	WP_234638567.1	divalent-cation tolerance protein CutA	-
L1Z78_RS22535 (TML_04477)	-	4949797..4950822 (-)	1026	WP_234638568.1	2-dehydropantoate 2-reductase	-
L1Z78_RS22540 (TML_04478)	-	4950841..4951599 (-)	759	WP_234638569.1	class II aldolase/adducin family protein	-
L1Z78_RS22545 (TML_04479)	-	4951632..4952198 (-)	567	WP_234638570.1	MarR family winged helix-turn-helix transcriptional regulator	-

Sequence

Protein

• Length: 402 a.a.
• Molecular weight: 41955.65 Da
• Isoelectric Point: 5.7911

>NTDB_id=1130390 L1Z78_RS22520 WP_234638565.1 4946943..4948151(+) (pilA) [Delftia tsuruhatensis isolate BB1455]
MFSFFKKKPTPPSAAEISPADRSAVPDQAGIPTPPAPDKASAPPAADAAAAEAGGASSWWRKPFGGGKGDATASSAPSAE
AAAPSSDFVAAPEPTAKPEAEGAGRQSWMQRLKAGLRKTGSSIATVFTGTQINDALYEELEDALLMADTGVKATEHLLAD
LRRRVKESKVTEPAAVKALLADALADLLRPLEKSLLIGEHQPTVIMVAGVNGAGKTTSIGKLTRHLAEEGQSVLLAAADT
FRAAAREQLGVWANRNTVEIVSQEGGDPAAVSFDAVSAGRARKKDVVLVDTAGRLPTQLHLMEELKKIRRVVSKADATAP
HEVLLVIDGNTGQNALAQVRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKVEDLETFNAREFAQAL
LS

Nucleotide

• Length: 1209 bp

>NTDB_id=1130390 L1Z78_RS22520 WP_234638565.1 4946943..4948151(+) (pilA) [Delftia tsuruhatensis isolate BB1455]
ATGTTCAGTTTTTTCAAGAAAAAGCCCACCCCCCCGTCCGCTGCCGAGATCTCCCCGGCGGACCGCAGCGCCGTGCCCGA
CCAGGCCGGCATTCCCACGCCCCCCGCACCGGACAAGGCTTCCGCCCCGCCCGCTGCCGACGCTGCTGCCGCCGAAGCAG
GTGGCGCGTCCTCCTGGTGGCGCAAGCCCTTCGGCGGCGGCAAAGGCGATGCCACCGCTTCCAGCGCACCCTCGGCCGAA
GCCGCGGCGCCATCGTCCGACTTCGTCGCCGCGCCCGAGCCCACGGCCAAGCCCGAGGCCGAGGGCGCCGGCCGCCAGAG
CTGGATGCAGCGTCTCAAGGCCGGCCTGCGCAAGACCGGCAGCAGCATCGCCACAGTCTTCACCGGCACCCAGATCAACG
ACGCGCTGTACGAGGAACTCGAGGACGCGCTGCTGATGGCCGACACCGGCGTCAAGGCCACCGAGCACCTGCTCGCCGAC
CTGCGCCGCCGCGTCAAGGAATCCAAGGTCACCGAGCCGGCCGCCGTCAAGGCCCTGCTGGCCGATGCCCTGGCCGACCT
GCTGCGCCCGCTGGAAAAGTCGCTGCTCATCGGCGAGCACCAGCCCACCGTGATCATGGTCGCCGGCGTCAACGGCGCGG
GCAAGACCACCTCGATCGGCAAGCTGACCCGGCACCTGGCCGAGGAAGGCCAGAGCGTGCTGCTGGCCGCGGCCGACACC
TTCCGTGCCGCCGCGCGCGAGCAGCTCGGCGTCTGGGCCAATCGCAACACCGTGGAGATCGTCAGCCAGGAGGGCGGCGA
TCCCGCCGCCGTGAGCTTTGACGCCGTCAGCGCCGGCCGCGCCCGCAAGAAGGATGTGGTGCTGGTGGACACGGCGGGCC
GCCTGCCCACCCAGTTGCACCTGATGGAAGAGCTCAAGAAGATCCGCCGCGTGGTCAGCAAGGCCGACGCGACGGCGCCC
CACGAGGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCGCTGGCCCAGGTGCGCGCCTTCGACGATGCGCTGCA
ACTCACGGGCCTGATCGTCACCAAGCTCGACGGCACGGCCAAGGGCGGGGTGCTGGCCGCCATTGCCCAGGAGCGACCGA
TTCCCGTGTATTTCATCGGCGTGGGCGAGAAGGTCGAGGACCTGGAGACCTTCAACGCCCGGGAATTCGCGCAGGCGCTG
CTGTCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (202-401)

• SRP54-type protein, helical bundle domain (SRP54_N) (121-184)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.687	100	0.507