Detailed information    

insolico Bioinformatically predicted

Overview

Name   MMJJ_RS05685   Type   Machinery gene
Locus tag   KMP69_RS03800 Genome accession   NZ_LR792632
Coordinates   669708..669926 (-) Length   72 a.a.
NCBI ID   WP_214400605.1    Uniprot ID   A0A8D6SUJ5
Organism   Methanocaldococcus lauensis strain SG7     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 664708..674926
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KMP69_RS03780 (MLAUSG7_0753) - 666007..666792 (+) 786 WP_214400602.1 RlmF-related methyltransferase -
  KMP69_RS03785 (MLAUSG7_0754) - 666803..667582 (+) 780 WP_214400603.1 isopentenyl phosphate kinase -
  KMP69_RS03790 (MLAUSG7_0755) - 667589..669421 (-) 1833 WP_250543634.1 DUF6541 family protein -
  KMP69_RS03795 (MLAUSG7_0756) - 669428..669649 (-) 222 WP_214400604.1 class III signal peptide-containing protein -
  KMP69_RS03800 (MLAUSG7_0757) MMJJ_RS05685 669708..669926 (-) 219 WP_214400605.1 class III signal peptide-containing protein Machinery gene
  KMP69_RS03805 (MLAUSG7_0758) - 670019..670294 (-) 276 WP_214400606.1 transcriptional regulator -
  KMP69_RS03810 (MLAUSG7_0759) - 670305..670841 (-) 537 WP_214400607.1 hypothetical protein -
  KMP69_RS03815 (MLAUSG7_0760) nifH 670847..671719 (-) 873 WP_214400608.1 nitrogenase iron protein -
  KMP69_RS03820 (MLAUSG7_0761) - 671750..672619 (-) 870 WP_214400609.1 PHP domain-containing protein -
  KMP69_RS03825 (MLAUSG7_0762) - 672629..674065 (-) 1437 WP_214400746.1 NAD(P)H-hydrate dehydratase -

Sequence

Protein


Download         Length: 72 a.a.        Molecular weight: 7404.73 Da        Isoelectric Point: 10.6001

>NTDB_id=1130323 KMP69_RS03800 WP_214400605.1 669708..669926(-) (MMJJ_RS05685) [Methanocaldococcus lauensis strain SG7]
MKILKKLLSKKGQVSMEIGILIAAAVAVAAIAAYFYATNVKGAASRAGAAANSTIENMSNAANKYANLMSNI

Nucleotide


Download         Length: 219 bp        

>NTDB_id=1130323 KMP69_RS03800 WP_214400605.1 669708..669926(-) (MMJJ_RS05685) [Methanocaldococcus lauensis strain SG7]
ATGAAAATCTTAAAAAAATTGTTGTCAAAGAAAGGGCAGGTTTCAATGGAGATAGGAATTTTAATTGCTGCAGCTGTTGC
AGTTGCCGCTATTGCAGCATACTTCTATGCTACAAATGTCAAAGGAGCTGCAAGTAGAGCAGGAGCTGCAGCAAACTCAA
CAATAGAAAACATGTCAAATGCAGCTAATAAATATGCAAATTTAATGAGTAATATTTAA

Domains

Predicted by InterproScan.

Class III signal peptide (Class_IIIsignal)

(10-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  MMJJ_RS05685 Methanococcus maripaludis strain DSM 2067

66.667

100

0.667
  epdE Methanococcus maripaludis strain DSM 2067

55.738

84.722

0.472

Multiple sequence alignment