Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | NSCAC_RS07205 | Genome accession | NZ_LR778175 |
| Coordinates | 1504071..1505405 (-) | Length | 444 a.a. |
| NCBI ID | WP_197744139.1 | Uniprot ID | A0A7G1QBA2 |
| Organism | Candidatus Nitrosacidococcus tergens isolate NSCAC1 | ||
| Function | regulate pilin expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1499071..1510405
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSCAC_RS07170 (NSCAC_1463) | - | 1499461..1500666 (+) | 1206 | WP_197744133.1 | ABC transporter permease | - |
| NSCAC_RS07175 (NSCAC_1464) | - | 1500722..1501183 (+) | 462 | WP_197744134.1 | hypothetical protein | - |
| NSCAC_RS07180 (NSCAC_1465) | - | 1501184..1501594 (-) | 411 | WP_197744135.1 | YqaA family protein | - |
| NSCAC_RS07185 (NSCAC_1466) | - | 1501638..1502099 (-) | 462 | WP_197744136.1 | pilin | - |
| NSCAC_RS08905 (NSCAC_1467) | - | 1502150..1502638 (-) | 489 | WP_269474121.1 | pilin | - |
| NSCAC_RS07195 (NSCAC_1468) | - | 1502644..1502808 (-) | 165 | WP_197744137.1 | type IV pilin protein | - |
| NSCAC_RS07200 (NSCAC_1469) | - | 1502958..1503437 (-) | 480 | WP_197744138.1 | pilin | - |
| NSCAC_RS07205 (NSCAC_1470) | pilR | 1504071..1505405 (-) | 1335 | WP_197744139.1 | sigma-54 dependent transcriptional regulator | Regulator |
| NSCAC_RS07210 (NSCAC_1471) | - | 1505407..1507566 (-) | 2160 | WP_197744140.1 | nitrogen regulation protein NR(II) | - |
| NSCAC_RS07215 (NSCAC_1472) | - | 1507615..1507848 (-) | 234 | WP_197744141.1 | PP0621 family protein | - |
| NSCAC_RS07220 (NSCAC_1473) | typA | 1507855..1509684 (-) | 1830 | WP_197744142.1 | translational GTPase TypA | - |
Sequence
Protein
Download Length: 444 a.a. Molecular weight: 49290.21 Da Isoelectric Point: 8.0003
>NTDB_id=1130244 NSCAC_RS07205 WP_197744139.1 1504071..1505405(-) (pilR) [Candidatus Nitrosacidococcus tergens isolate NSCAC1]
MNKSPIVLVVDDEPDILELLDLTLMGMKINCQKAMNFIEASKHLKANSFNLCLTDMRLPDGSGLDLVKLINQDYPQIPVA
VITAYGSVETAVEALKSGAFDFISKPLDVKSLRNLVKMALKMPFAPLQKAKGNYQLLGESSTMEAVRSKITKLACSQAPV
YISGESGTGKELVARLIHRQGPRASGPFVPVNCGAIPESLMESEFFGHEKGSFTGASRDKEGLFQAAQEGTLFLDEVADL
PIQMQVKLLRAIQERAVRPIGSQREVPVDVRILCATHQDLSQLVNEGKFRQDLFYRLNIVELQVPPLRERAKDIPVLAKH
ILTQLALRGNHACPQITPSALEKLQSYPFPGNVRELENILERALVLHEGGIIDARNLHLPKDTSWPDKLHSLGEASLERH
LEDLEKQAILRALEQTGYNKTAAARLLGITFRALRYRLKKLNLE
MNKSPIVLVVDDEPDILELLDLTLMGMKINCQKAMNFIEASKHLKANSFNLCLTDMRLPDGSGLDLVKLINQDYPQIPVA
VITAYGSVETAVEALKSGAFDFISKPLDVKSLRNLVKMALKMPFAPLQKAKGNYQLLGESSTMEAVRSKITKLACSQAPV
YISGESGTGKELVARLIHRQGPRASGPFVPVNCGAIPESLMESEFFGHEKGSFTGASRDKEGLFQAAQEGTLFLDEVADL
PIQMQVKLLRAIQERAVRPIGSQREVPVDVRILCATHQDLSQLVNEGKFRQDLFYRLNIVELQVPPLRERAKDIPVLAKH
ILTQLALRGNHACPQITPSALEKLQSYPFPGNVRELENILERALVLHEGGIIDARNLHLPKDTSWPDKLHSLGEASLERH
LEDLEKQAILRALEQTGYNKTAAARLLGITFRALRYRLKKLNLE
Nucleotide
Download Length: 1335 bp
>NTDB_id=1130244 NSCAC_RS07205 WP_197744139.1 1504071..1505405(-) (pilR) [Candidatus Nitrosacidococcus tergens isolate NSCAC1]
ATGAACAAATCACCAATCGTACTCGTTGTTGATGATGAACCTGATATTTTAGAGCTTCTTGATTTGACTCTAATGGGGAT
GAAAATTAATTGCCAAAAAGCAATGAATTTTATTGAAGCCAGTAAACATCTTAAAGCAAACTCCTTTAACCTATGCTTAA
CCGATATGCGACTACCCGATGGTAGTGGGTTAGATTTAGTCAAACTGATTAACCAAGACTACCCTCAAATCCCTGTAGCA
GTGATCACTGCCTATGGTAGTGTAGAAACTGCAGTAGAGGCTTTAAAATCAGGTGCCTTTGATTTTATCTCTAAACCTTT
GGATGTAAAATCTCTACGCAATTTAGTGAAAATGGCATTAAAAATGCCTTTTGCTCCCCTGCAAAAAGCGAAGGGTAACT
ACCAGCTCCTTGGGGAATCTTCTACTATGGAAGCGGTGCGAAGCAAAATTACTAAGCTGGCGTGTAGCCAAGCTCCTGTC
TATATCAGTGGAGAATCCGGTACCGGTAAAGAATTAGTGGCTCGCCTTATTCATCGCCAAGGACCCAGAGCATCAGGTCC
TTTTGTGCCTGTCAACTGTGGCGCCATTCCAGAAAGTCTGATGGAAAGTGAGTTCTTTGGCCATGAAAAGGGAAGTTTCA
CTGGAGCCTCTCGAGATAAAGAAGGGCTTTTCCAAGCCGCTCAAGAAGGTACTTTATTTTTAGATGAAGTGGCAGATTTA
CCCATACAAATGCAGGTAAAGCTCCTTCGTGCCATTCAAGAGCGTGCAGTTCGCCCCATTGGTAGCCAAAGAGAAGTACC
AGTAGATGTACGGATTTTATGTGCCACCCATCAGGATCTTTCTCAACTGGTGAATGAAGGGAAATTTCGCCAAGATCTAT
TCTACCGACTCAATATTGTCGAGCTACAAGTACCTCCTTTAAGAGAGCGTGCAAAGGATATTCCTGTTTTAGCCAAGCAT
ATTCTTACCCAGCTGGCACTGCGGGGTAATCATGCCTGTCCTCAAATTACGCCTAGTGCACTTGAGAAACTGCAAAGTTA
TCCTTTCCCCGGCAATGTACGGGAGCTAGAGAATATCCTTGAACGGGCCCTAGTGCTCCATGAGGGAGGAATCATTGATG
CCAGAAATTTACACCTACCTAAAGACACCAGCTGGCCAGATAAGCTCCATTCTCTTGGAGAGGCTTCCCTAGAGCGTCAC
CTTGAAGATCTAGAAAAACAAGCAATTCTACGGGCATTAGAGCAAACTGGCTATAACAAAACGGCAGCAGCAAGGCTGCT
AGGGATTACGTTTCGTGCCCTTCGCTATCGCTTAAAGAAACTTAATTTAGAATAA
ATGAACAAATCACCAATCGTACTCGTTGTTGATGATGAACCTGATATTTTAGAGCTTCTTGATTTGACTCTAATGGGGAT
GAAAATTAATTGCCAAAAAGCAATGAATTTTATTGAAGCCAGTAAACATCTTAAAGCAAACTCCTTTAACCTATGCTTAA
CCGATATGCGACTACCCGATGGTAGTGGGTTAGATTTAGTCAAACTGATTAACCAAGACTACCCTCAAATCCCTGTAGCA
GTGATCACTGCCTATGGTAGTGTAGAAACTGCAGTAGAGGCTTTAAAATCAGGTGCCTTTGATTTTATCTCTAAACCTTT
GGATGTAAAATCTCTACGCAATTTAGTGAAAATGGCATTAAAAATGCCTTTTGCTCCCCTGCAAAAAGCGAAGGGTAACT
ACCAGCTCCTTGGGGAATCTTCTACTATGGAAGCGGTGCGAAGCAAAATTACTAAGCTGGCGTGTAGCCAAGCTCCTGTC
TATATCAGTGGAGAATCCGGTACCGGTAAAGAATTAGTGGCTCGCCTTATTCATCGCCAAGGACCCAGAGCATCAGGTCC
TTTTGTGCCTGTCAACTGTGGCGCCATTCCAGAAAGTCTGATGGAAAGTGAGTTCTTTGGCCATGAAAAGGGAAGTTTCA
CTGGAGCCTCTCGAGATAAAGAAGGGCTTTTCCAAGCCGCTCAAGAAGGTACTTTATTTTTAGATGAAGTGGCAGATTTA
CCCATACAAATGCAGGTAAAGCTCCTTCGTGCCATTCAAGAGCGTGCAGTTCGCCCCATTGGTAGCCAAAGAGAAGTACC
AGTAGATGTACGGATTTTATGTGCCACCCATCAGGATCTTTCTCAACTGGTGAATGAAGGGAAATTTCGCCAAGATCTAT
TCTACCGACTCAATATTGTCGAGCTACAAGTACCTCCTTTAAGAGAGCGTGCAAAGGATATTCCTGTTTTAGCCAAGCAT
ATTCTTACCCAGCTGGCACTGCGGGGTAATCATGCCTGTCCTCAAATTACGCCTAGTGCACTTGAGAAACTGCAAAGTTA
TCCTTTCCCCGGCAATGTACGGGAGCTAGAGAATATCCTTGAACGGGCCCTAGTGCTCCATGAGGGAGGAATCATTGATG
CCAGAAATTTACACCTACCTAAAGACACCAGCTGGCCAGATAAGCTCCATTCTCTTGGAGAGGCTTCCCTAGAGCGTCAC
CTTGAAGATCTAGAAAAACAAGCAATTCTACGGGCATTAGAGCAAACTGGCTATAACAAAACGGCAGCAGCAAGGCTGCT
AGGGATTACGTTTCGTGCCCTTCGCTATCGCTTAAAGAAACTTAATTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Pseudomonas aeruginosa PAK |
61.765 |
99.55 |
0.615 |
| pilR | Acinetobacter baumannii strain A118 |
47.516 |
100 |
0.495 |