Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   GPW48_RS09460 Genome accession   NZ_LR738720
Coordinates   1876628..1877887 (-) Length   419 a.a.
NCBI ID   WP_012027845.1    Uniprot ID   A0A0Z8VH60
Organism   Streptococcus suis isolate GD-0001     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1871628..1882887
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPW48_RS09435 dhaK 1871883..1872872 (+) 990 WP_024405896.1 dihydroxyacetone kinase subunit DhaK -
  GPW48_RS09440 dhaL 1872883..1873458 (+) 576 WP_002938759.1 dihydroxyacetone kinase subunit DhaL -
  GPW48_RS09445 dhaM 1873455..1873829 (+) 375 WP_024403233.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  GPW48_RS09450 - 1873839..1874549 (+) 711 WP_074390024.1 MIP/aquaporin family protein -
  GPW48_RS09455 - 1874629..1876491 (-) 1863 WP_074390025.1 proline--tRNA ligase -
  GPW48_RS09460 eeP 1876628..1877887 (-) 1260 WP_012027845.1 M50 family metallopeptidase Regulator
  GPW48_RS09465 - 1877897..1878703 (-) 807 WP_012027846.1 phosphatidate cytidylyltransferase -
  GPW48_RS09470 - 1878713..1879468 (-) 756 WP_012775352.1 isoprenyl transferase -
  GPW48_RS09475 yajC 1879582..1879905 (-) 324 WP_024386126.1 preprotein translocase subunit YajC -
  GPW48_RS09480 - 1880015..1881307 (-) 1293 WP_074390026.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44889.21 Da        Isoelectric Point: 5.6974

>NTDB_id=1129413 GPW48_RS09460 WP_012027845.1 1876628..1877887(-) (eeP) [Streptococcus suis isolate GD-0001]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFILLFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKNRHVSVTAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=1129413 GPW48_RS09460 WP_012027845.1 1876628..1877887(-) (eeP) [Streptococcus suis isolate GD-0001]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTCGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAAGGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCCTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTCGAGGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGATGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAATAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCGGGTCCCATGAATAACTTTATTTTAGGGATTCTAGTATT
TATTCTTTTGTTCTTCATGCAAGGAGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCTGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGTAAAGCAGCAACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTCGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGGCCTATCGAATTGGTATTTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTAACAGCTTTGAAGAATCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCAGCTGAATTTGGTTTGGTTTCTGTATT
GGGGCTAATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0Z8VH60

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65

100

0.652

  eeP Streptococcus thermophilus LMD-9

65

100

0.652


Multiple sequence alignment