Detailed information NTG1129297

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: AQULUS_RS01695
• Genome accession: NZ_LR699119
• Coordinates: 360514..361560 (-)
• Length: 348 a.a.
• NCBI ID: WP_148338016.1
• Uniprot ID: A0A5E4PFC9
• Organism: Aquicella siphonis strain SGT-108
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 355514..366560

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AQULUS_RS01665 (AQUSIP_03310)	murU	355534..356208 (+)	675	WP_148338009.1	N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU	-
AQULUS_RS01675 (AQUSIP_03330)	comM	356607..358124 (+)	1518	WP_148340244.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
AQULUS_RS01680 (AQUSIP_03340)	-	358264..358656 (+)	393	WP_148338011.1	hypothetical protein	-
AQULUS_RS01685 (AQUSIP_03350)	-	358649..359347 (+)	699	WP_148338014.1	hypothetical protein	-
AQULUS_RS01690 (AQUSIP_03360)	rpoH	359528..360394 (-)	867	WP_148340245.1	RNA polymerase sigma factor RpoH	-
AQULUS_RS01695 (AQUSIP_03370)	pilA	360514..361560 (-)	1047	WP_148338016.1	signal recognition particle-docking protein FtsY	Machinery gene
AQULUS_RS01700 (AQUSIP_03380)	rsmD	361830..362390 (+)	561	WP_148338018.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
AQULUS_RS01705 (AQUSIP_03390)	trpS	362387..363457 (+)	1071	WP_148338020.1	tryptophan--tRNA ligase	-
AQULUS_RS01710 (AQUSIP_03400)	-	363457..363588 (+)	132	WP_148338022.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
AQULUS_RS01715 (AQUSIP_03410)	-	363857..364264 (+)	408	WP_148338024.1	hypothetical protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37287.90 Da
• Isoelectric Point: 8.0960

>NTDB_id=1129297 AQULUS_RS01695 WP_148338016.1 360514..361560(-) (pilA) [Aquicella siphonis strain SGT-108]
MFDFLKRKKNTDTADSPNPVETGIAPAGEDIRNKPGLFARLKQGLSKTRATLATGMANLFLGKKEISQDLLNDIEMALLT
ADVGVETTDQLIQALTRKLARKELNDAQTAFHFLQEEMKQILRPCAVPLSIAPETRPFVILVVGINGSGKTTTIGKLASH
FKQQGKHIMLAAGDTFRAAAIEQLQVWGSRNQVPVIAQQPGADTAAVIFDAMEAAKARGADILIADTAGRLHTQSNLMAE
LQKVKRVLAKTDSSAPHETLIVLDASLGQNALNQVKQFNEAMGVTGIVLTKLDGTAKGGIIFAIANQTKIPIRFIGIGEG
IQDLRPFDADDFVNALFAGESSQPAPSA

Nucleotide

• Length: 1047 bp

>NTDB_id=1129297 AQULUS_RS01695 WP_148338016.1 360514..361560(-) (pilA) [Aquicella siphonis strain SGT-108]
ATGTTTGACTTTCTCAAGAGAAAAAAAAATACCGATACAGCAGACAGCCCTAACCCTGTTGAAACGGGCATCGCGCCTGC
TGGAGAAGATATCCGGAACAAGCCGGGGCTTTTCGCCCGTCTCAAACAAGGACTATCAAAAACCCGAGCTACTCTCGCAA
CAGGCATGGCCAATCTTTTTCTTGGCAAAAAAGAGATCAGCCAGGATTTGTTAAATGATATAGAAATGGCTTTATTGACG
GCGGATGTCGGCGTTGAAACAACCGACCAGTTAATTCAAGCCCTGACCAGGAAGCTCGCGCGCAAAGAACTGAATGACGC
CCAAACGGCCTTTCATTTTCTCCAGGAAGAAATGAAACAAATTCTCAGGCCCTGCGCAGTACCCTTATCCATCGCCCCGG
AAACCAGGCCCTTTGTTATTCTCGTTGTCGGGATTAACGGGTCAGGAAAGACCACCACCATAGGCAAACTCGCCAGTCAT
TTCAAACAGCAAGGAAAGCATATCATGCTGGCGGCAGGTGATACTTTCCGCGCAGCGGCCATTGAACAGCTTCAGGTTTG
GGGCAGCCGCAACCAGGTTCCCGTGATCGCTCAGCAACCGGGAGCCGATACTGCCGCAGTCATTTTCGACGCCATGGAAG
CAGCCAAGGCCCGTGGCGCGGATATATTGATTGCGGATACGGCCGGCCGTCTGCACACCCAGTCCAACCTGATGGCCGAA
CTGCAAAAAGTCAAACGCGTGCTCGCCAAGACCGATTCTTCCGCGCCGCACGAAACCCTGATCGTGCTGGATGCCTCATT
GGGCCAGAATGCCTTGAACCAGGTCAAGCAATTCAATGAAGCCATGGGCGTGACCGGCATTGTATTAACCAAGCTTGATG
GCACCGCCAAGGGCGGCATTATTTTTGCCATTGCCAACCAGACAAAAATACCTATTAGATTCATAGGGATAGGAGAAGGA
ATTCAAGACTTGCGGCCTTTTGACGCAGATGATTTTGTCAACGCCTTGTTCGCCGGCGAATCCTCCCAGCCCGCCCCATC
CGCGTAG

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (53-118)

• SRP54-type protein, GTPase domain (SRP54) (137-337)

3D structure

• AlphaFold DB: A0A5E4PFC9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	55.229	87.931	0.486