Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   FXY43_RS03610 Genome accession   NZ_LR698972
Coordinates   725751..726524 (+) Length   257 a.a.
NCBI ID   WP_011992128.1    Uniprot ID   A7GXR0
Organism   Campylobacter curvus isolate MGYG-HGUT-01706     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 720751..731524
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FXY43_RS03595 - 722370..723188 (-) 819 WP_011992125.1 HDOD domain-containing protein -
  FXY43_RS03600 ilvC 723333..724355 (+) 1023 WP_011992126.1 ketol-acid reductoisomerase -
  FXY43_RS03605 - 724360..725754 (+) 1395 WP_011992127.1 divergent polysaccharide deacetylase family protein -
  FXY43_RS03610 dprA 725751..726524 (+) 774 WP_011992128.1 DNA-processing protein DprA Machinery gene
  FXY43_RS03615 ruvX 726521..726904 (+) 384 WP_011992129.1 Holliday junction resolvase RuvX -
  FXY43_RS03620 - 726947..727774 (-) 828 WP_011992130.1 hypothetical protein -
  FXY43_RS03625 queA 727771..728802 (-) 1032 WP_011992131.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  FXY43_RS03630 tatC 728789..729532 (-) 744 WP_011992132.1 twin-arginine translocase subunit TatC -
  FXY43_RS03635 tatB 729532..729960 (-) 429 WP_009649969.1 Sec-independent protein translocase protein TatB -
  FXY43_RS03640 hemW 730026..731072 (-) 1047 WP_011992133.1 radical SAM family heme chaperone HemW -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 27668.06 Da        Isoelectric Point: 5.1971

>NTDB_id=1128750 FXY43_RS03610 WP_011992128.1 725751..726524(+) (dprA) [Campylobacter curvus isolate MGYG-HGUT-01706]
MKFLAIDELPACLVRLENTPKGLYAIGDVSLLNLPKVAVVGSRKASVYTKECVRDLCTRLKNAGVCVVSGGAIGVDIAAH
KAAMPLTIGIFASGLDIIYPPSNAKFIKEIYENSLALSEYENGEPPLAYRFLERNRIVVALCEALVVAQADVKSGSMQSA
RLAGELGVPVFVLPQRINESGGTNKLLSEGKATLISDYDEFAAKFGDVKFAPSSDEILEFCKNGASLDDALSKFGDKIYE
YELLGKLEISNLRVKAL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=1128750 FXY43_RS03610 WP_011992128.1 725751..726524(+) (dprA) [Campylobacter curvus isolate MGYG-HGUT-01706]
ATGAAATTTTTAGCTATAGACGAGCTGCCCGCTTGCTTGGTGCGTCTTGAAAATACGCCAAAAGGACTCTACGCGATCGG
CGATGTCTCGCTTTTAAATTTACCAAAGGTCGCAGTCGTGGGCTCTAGAAAGGCGAGCGTCTATACCAAAGAGTGCGTGA
GAGATCTTTGCACTAGGCTGAAAAATGCCGGTGTTTGCGTCGTGAGCGGTGGAGCTATCGGAGTGGATATCGCTGCACAT
AAGGCTGCGATGCCCCTTACTATCGGCATCTTTGCAAGCGGACTTGATATCATCTATCCGCCCTCAAATGCAAAATTTAT
AAAAGAAATCTACGAAAATTCCTTGGCCCTTAGCGAATACGAAAACGGCGAGCCGCCGCTTGCTTATAGATTTTTAGAGC
GAAACCGCATAGTAGTGGCGCTTTGCGAGGCGCTAGTCGTAGCTCAGGCCGACGTTAAAAGCGGCTCGATGCAAAGTGCG
AGACTGGCCGGAGAGCTTGGCGTACCGGTGTTCGTCCTGCCTCAGCGCATAAACGAAAGCGGTGGTACGAATAAGCTTCT
AAGCGAAGGCAAAGCCACGCTGATAAGCGACTACGACGAGTTTGCGGCGAAATTTGGCGATGTAAAATTCGCACCTTCAA
GCGATGAAATTTTAGAATTTTGCAAAAACGGAGCGAGCTTGGACGATGCTTTATCGAAATTTGGCGATAAAATCTACGAA
TACGAGCTTCTTGGCAAGCTTGAAATATCGAATTTAAGAGTAAAAGCCCTATGA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(7-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7GXR0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

59.74

89.883

0.537
  dprA Helicobacter pylori 26695

45.312

99.611

0.451

Multiple sequence alignment