Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   FQT67_RS10855 Genome accession   NZ_LR595857
Coordinates   59611..59706 (+) Length   31 a.a.
NCBI ID   WP_198455558.1    Uniprot ID   -
Organism   Streptococcus sp. NCTC 11567 strain NCTC11567     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 54611..64706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQT67_RS00345 (NCTC11567_00071) - 55135..56994 (+) 1860 WP_143936354.1 DUF262 domain-containing protein -
  FQT67_RS00350 (NCTC11567_00072) purB 57179..58471 (+) 1293 WP_022554088.1 adenylosuccinate lyase -
  FQT67_RS00355 (NCTC11567_00073) comR 58613..59524 (+) 912 WP_012766420.1 XRE family transcriptional regulator Regulator
  FQT67_RS10855 (NCTC11567_00074) comS 59611..59706 (+) 96 WP_198455558.1 quorum-sensing system DWW-type pheromone Regulator
  FQT67_RS00360 (NCTC11567_00075) ruvB 59758..60756 (+) 999 WP_015057190.1 Holliday junction branch migration DNA helicase RuvB -
  FQT67_RS00365 (NCTC11567_00076) - 60891..61322 (+) 432 WP_003059365.1 low molecular weight protein-tyrosine-phosphatase -
  FQT67_RS00370 (NCTC11567_00077) - 61351..61752 (+) 402 WP_003049089.1 MORN repeat-containing protein -
  FQT67_RS00375 (NCTC11567_00078) - 61749..63524 (+) 1776 WP_003059359.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 31 a.a.        Molecular weight: 3929.72 Da        Isoelectric Point: 10.1669

>NTDB_id=1128458 FQT67_RS10855 WP_198455558.1 59611..59706(+) (comS) [Streptococcus sp. NCTC 11567 strain NCTC11567]
MFKRYHYYFILTAMLAFKAAQMISQVDWWRL

Nucleotide


Download         Length: 96 bp        

>NTDB_id=1128458 FQT67_RS10855 WP_198455558.1 59611..59706(+) (comS) [Streptococcus sp. NCTC 11567 strain NCTC11567]
ATGTTCAAAAGATATCACTACTATTTTATACTTACTGCTATGTTAGCATTTAAAGCAGCTCAGATGATAAGTCAAGTGGA
TTGGTGGCGTTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

61.29

100

0.613
  comS Streptococcus pyogenes MGAS315

38.71

100

0.387

Multiple sequence alignment