Detailed information NTG1128227

Bioinformatically predicted

Overview

• Name: pilE
• Type: Machinery gene
• Locus tag: WDLP6_RS07345
• Genome accession: NZ_LR594671
• Coordinates: 1501555..1502004 (+)
• Length: 149 a.a.
• NCBI ID: WP_162591805.1
• Uniprot ID: A0A6P2EH34
• Organism: Variovorax sp. PBL-E5
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1496555..1507004

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WDLP6_RS07335 (E5CHR_01467)	-	1497458..1497958 (+)	501	WP_162591804.1	pilus assembly protein PilX	-
WDLP6_RS07340 (E5CHR_01468)	-	1497972..1501547 (+)	3576	WP_232076988.1	PilC/PilY family type IV pilus protein	-
WDLP6_RS07345 (E5CHR_01469)	pilE	1501555..1502004 (+)	450	WP_162591805.1	type IV pilin protein	Machinery gene
WDLP6_RS07350 (E5CHR_01470)	-	1502015..1502635 (-)	621	WP_162591806.1	UbiX family flavin prenyltransferase	-
WDLP6_RS07355 (E5CHR_01471)	-	1502653..1503714 (-)	1062	WP_162591807.1	GTP-binding protein	-
WDLP6_RS07360 (E5CHR_01472)	-	1503729..1506023 (-)	2295	WP_162591808.1	molybdopterin cofactor-binding domain-containing protein	-
WDLP6_RS07365 (E5CHR_01473)	-	1506020..1506502 (-)	483	WP_162591809.1	(2Fe-2S)-binding protein	-

Sequence

Protein

• Length: 149 a.a.
• Molecular weight: 16030.05 Da
• Isoelectric Point: 6.8912

>NTDB_id=1128227 WDLP6_RS07345 WP_162591805.1 1501555..1502004(+) (pilE) [Variovorax sp. PBL-E5]
MNDSFAFSNTRPRRTAISGFTLLELMITLAIVALLTVIAMPSYRSYVLRSHRSDAYAALTQDQAILERCYAQNYSYSQAC
AALPAFPQTSAQNFYTVVLTQSATSYLLTATPSGSQLADTACASLSIDQTNSKTALDSQGVASASCWGQ

Nucleotide

• Length: 450 bp

>NTDB_id=1128227 WDLP6_RS07345 WP_162591805.1 1501555..1502004(+) (pilE) [Variovorax sp. PBL-E5]
ATGAACGATTCATTTGCTTTCTCGAACACGCGCCCACGCCGCACGGCCATCTCCGGCTTCACGTTGCTGGAACTGATGAT
CACGCTCGCCATCGTGGCGCTGCTGACCGTCATCGCAATGCCTTCCTATCGCAGCTATGTATTGCGATCGCACCGCTCCG
ATGCCTACGCGGCCCTGACGCAGGATCAGGCGATTCTCGAACGTTGCTATGCGCAGAACTATTCGTACAGCCAGGCATGC
GCCGCTTTGCCGGCCTTTCCGCAGACATCAGCGCAGAACTTCTACACCGTGGTGCTGACGCAAAGCGCGACCTCATACCT
GCTTACCGCGACCCCGTCGGGATCTCAACTGGCCGATACCGCGTGCGCATCCCTCTCCATCGACCAGACGAACAGCAAGA
CGGCGCTCGACAGTCAAGGCGTGGCCAGCGCTTCATGCTGGGGACAATGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (41-126)

• Prokaryotic N-terminal methylation motif (N_methyl) (18-40)

3D structure

• AlphaFold DB: A0A6P2EH34

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilE	Legionella pneumophila str. Paris	54.412	91.275	0.497
pilE	Legionella pneumophila strain ERS1305867	54.412	91.275	0.497